CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g017878m.g
(
Citrus sinensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
orange1.1g017878m.g
T334631_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g017878m
Sox
168
210
CSFVGTYKELRKHMKADHPSARPREVDPLLEQKWRRFERERER
orange1.1g017918m
Sox
168
210
CSFVGTYKELRKHMKADHPSARPREVDPLLEQKWRRFERERER
orange1.1g017923m
Sox
168
210
CSFVGTYKELRKHMKADHPSARPREVDPLLEQKWRRFERERER
orange1.1g020042m
Sox
168
210
CSFVGTYKELRKHMKADHPSARPREVDPLLEQKWRRFERERER
Links
Other
Sox
family TFs
Other
Citrus sinensis
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy