orange1.1g017939m.g (Citrus sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 orange1.1g017939m.g T334632_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g017939m Sox 173 240
orange1.1g017939m Sox 289 355

Links

Other Sox family TFs
Other Citrus sinensis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava45417.m1 Manihot esculenta cassava45417.m1 N 0.554
GLYMA01G07470 Glycine max GLYMA01G07470 N 0.504
TCM_016416 Theobroma cacao TCM_016416 I 0.450