Pavir.J20558 (Panicum virgatum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pavir.J20558 T334687_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J20558.1.p Sox 557 625
Pavir.J20558.2.p Sox 556 624
Pavir.J20558.3.p Sox 504 572
Pavir.J20558.4.p Sox 504 572

Links

Other Sox family TFs
Other Panicum virgatum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I 0.000
CapteG109027 Capitella teleta CapteG109027 I 0.000
D917_04639 Trichinella nativa D917_04639 N 0.000
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I 0.000
maker-nMf.1.1.scaf03287-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03287-augustus-gene-0.5 N 0.000
NECAME_06333 Necator americanus NECAME_06333 I 0.000
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I 0.000
Ppa-pal-1 Pristionchus pacificus PPA02358 I 0.000
SVUK_0001504901 Strongylus vulgaris SVUK_0001504901 I 0.000