EFA82179.1 (Polysphondylium pallidum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 EFA82179.1 T334830_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.489 0.478
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.489 0.478
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.489 0.449
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.489 0.449
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFA82179.1 Sox 52 120

Links

Other Sox family TFs
Other Polysphondylium pallidum TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgeneshDP_kg.C_scaffold_625000001 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_625000001 I 0.707
fgeneshDP_kg.C_scaffold_93000006 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_93000006 I 0.654
estExt_fgeneshDP_kg.C_1050006 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1050006 I 0.626
gw1.204.1.1 Dictyostelium purpureum gw1.204.1.1 I 0.624
nhp6 Dictyostelium discoideum DDB_G0270260 N 0.611
nhp6 Schizosaccharomyces pombe SPAC57A10.09c I 0.561
PHLGIDRAFT_113118 Phlebiopsis gigantea PHLGIDRAFT_113118 I 0.523
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I 0.521
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.514
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.514
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.512
FIBRA_06299 Fibroporia radiculosa FIBRA_06299 I 0.507
DICSQDRAFT_109066 Dichomitus squalens DICSQDRAFT_109066 I 0.507
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.507
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.507
CERSUDRAFT_85760 Ceriporiopsis subvermispora CERSUDRAFT_85760 I 0.507
BN946_scf184999.g62 Trametes cinnabarina BN946_scf184999.g62 I 0.507
PHACADRAFT_164552 Phanerochaete carnosa PHACADRAFT_164552 I 0.505
A1Q1_01571 Trichosporon asahii A1Q1_01571 I 0.502
CC1G_11882 Coprinopsis cinerea CC1G_11882 I 0.501
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.500
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.500
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.497
SOCG_02294 Schizosaccharomyces octosporus SOCG_02294 I 0.494
SPOG_00531 Schizosaccharomyces cryophilus SPOG_00531 I 0.491
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.489
NHP6A Saccharomyces cerevisiae YPR052C D 0.489
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.489
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.489
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.489
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.489
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.489
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.489
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.489
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.489
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.489
GLOTRDRAFT_99857 Gloeophyllum trabeum GLOTRDRAFT_99857 I 0.488
PLEOSDRAFT_1048718 Pleurotus ostreatus PLEOSDRAFT_1048718 I 0.488
GALMADRAFT_227783 Galerina marginata GALMADRAFT_227783 I 0.488
PLICRDRAFT_46399 Plicaturopsis crispa PLICRDRAFT_46399 I 0.488
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.488
M413DRAFT_45791 Hebeloma cylindrosporum M413DRAFT_45791 I 0.488
AGABI2DRAFT_56560 Agaricus bisporus AGABI2DRAFT_56560 I 0.488
Moror_35 Moniliophthora roreri Moror_35 I 0.488
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.486
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.486
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I 0.486
K443DRAFT_671387 Laccaria amethystina K443DRAFT_671387 I 0.486
LACBIDRAFT_184303 Laccaria bicolor LACBIDRAFT_184303 I 0.486
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.482
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.482
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.482
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.482
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.482
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.482
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.482
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.482
Cla017295 Citrullus lanatus Cla017295 I 0.482
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.482
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.482
G210_1137 Candida maltosa G210_1137 I 0.482
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.482
Cucsa.339070 Cucumis sativus Cucsa.339070 I 0.482
TCM_018380 Theobroma cacao TCM_018380 I 0.481
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.480
CNF04730 Cryptococcus neoformans CNF04730 I 0.479
L804_02852 Cryptococcus gattii L804_02852 I 0.479
MVLG_07162 Microbotryum violaceum MVLG_07162 I 0.479
Ca_10804 Cicer arietinum Ca_10804 I 0.478
MTR_1g022345 Medicago truncatula MTR_1g022345 I 0.478
MPER_13045 Moniliophthora perniciosa MPER_13045 I 0.478
MDP0000828844 Malus domestica MDP0000828844 I 0.476
SCHCODRAFT_76744 Schizophyllum commune SCHCODRAFT_76744 I 0.475
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.475
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.475
MDP0000310093 Malus domestica MDP0000310093 I 0.474
MELLADRAFT_31192 Melampsora laricipopulina MELLADRAFT_31192 I 0.473
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.473
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.473
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.473
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.473
gene01264-v1.0-hybrid Fragaria vesca gene01264-v1.0-hybrid I 0.472
Ca_12487 Cicer arietinum Ca_12487 I 0.472
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.472
gene01265-v1.0-hybrid Fragaria vesca gene01265-v1.0-hybrid I 0.472
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I 0.472
PK18077.1 Cannabis sativa PK18077.1 I 0.472
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I 0.472
Pm015842 Prunus mume Pm015842 I 0.472
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.471
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.471
SSRP1 Arabidopsis thaliana AT3G28730 I 0.471
BATDEDRAFT_89692 Batrachochytrium dendrobatidis BATDEDRAFT_89692 I 0.469
e_gw1.7.444.1 Tremella mesenterica e_gw1.7.444.1 I 0.468
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.467
PILCRDRAFT_812728 Piloderma croceum PILCRDRAFT_812728 I 0.467
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.466
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.466
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.466
PHSY_006278 Pseudozyma hubeiensis PHSY_006278 I 0.465
GSMUA_Achr2G19630_001 Musa acuminata GSMUA_Achr2G19630_001 I 0.463
mgf001267m Mimulus guttatus mgf001267m I 0.463
HETIRDRAFT_440787 Heterobasidion irregulare HETIRDRAFT_440787 I 0.463
estExt_fgenesh3_kg.C_50121 Heterobasidion annosum estExt_fgenesh3_kg.C_50121 I 0.463
AMTR_s00078p00107740 Amborella trichopoda AMTR_s00078p00107740 I 0.463
RHTO_03328 Rhodosporidium toruloides RHTO_03328 I 0.463
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.462
KNAG_0J02470 Kazachstania naganishii KNAG_0J02470 I 0.462
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.460
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.458
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.458
JAAARDRAFT_49184 Jaapia argillacea JAAARDRAFT_49184 I 0.455
M378DRAFT_77996 Amanita muscaria M378DRAFT_77996 I 0.455
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.455
CORT_0E02670 Candida orthopsilosis CORT_0E02670 I 0.454
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.454
CPAG_02417 Candida parapsilosis CPAG_02417 I 0.454
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.454
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.454
GNLVRS01_PISO0N04523g Millerozyma farinosa GNLVRS01_PISO0N04523g I 0.454
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.452
MDP0000301546 Malus domestica MDP0000301546 I 0.451
MSY001_2636 Malassezia sympodialis MSY001_2636 I 0.451
PredSwiss_ASS2010_160.1 Pneumocystis carinii PredSwiss_ASS2010_160.1 I 0.450
MGG_04489 Magnaporthe oryzae MGG_04489 I 0.450
PGTG_04701 Puccinia graminis PGTG_04701 I 0.450
PDE_04795 Penicillium oxalicum PDE_04795 I 0.450
SMAC_04223 Sordaria macrospora SMAC_04223 I 0.450
ATHMG Vitis vinifera VIT_14s0108g00040 I 0.450
ATEG_04695 Aspergillus terreus CADATEAG00010213 I 0.450
DOTSEDRAFT_74007 Dothistroma septosporum DOTSEDRAFT_74007 I 0.449
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.447
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.447
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.447
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.447
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.447
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.447
DEHA2D17710g Debaryomyces hansenii DEHA2D17710g I 0.447
CD36_41610 Candida dubliniensis CD36_41610 I 0.447
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.447
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.447
PSEUBRA_SCAF4g05002 Pseudozyma brasiliensis PSEUBRA_SCAF4g05002 I 0.446
PaG_04789 Pseudozyma aphidis PaG_04789 I 0.446
PAN0_004d2231 Pseudozyma antarctica PAN0_004d2231 I 0.446
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.446
UM02364 Ustilago maydis UM02364 I 0.446
Ciclev10011266m.g Citrus clementina Ciclev10011266m.g I 0.444
orange1.1g006512m.g Citrus sinensis orange1.1g006512m.g I 0.444
PTTG_09594 Puccinia triticina PTTG_09594 I 0.444
F503_07006 Ophiostoma piceae uamh F503_07006 I 0.444
SAPIO_CDS3210 Scedosporium apiospermum SAPIO_CDS3210 I 0.444
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.444
H072_4754 Dactylellina haptotyla H072_4754 I 0.444
SBOR_5988 Sclerotinia borealis SBOR_5988 I 0.444
MBM_05761 Marssonina brunnea MBM_05761 I 0.444
M438DRAFT_311243 Aureobasidium pullulans M438DRAFT_311243 I 0.443
DACRYDRAFT_23197 Dacryopinax sp DACRYDRAFT_23197 I 0.443
AUEXF2481DRAFT_68224 Aureobasidium subglaciale AUEXF2481DRAFT_68224 I 0.443
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.442
GLYMA13G05140 Glycine max GLYMA13G05140 I 0.441
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.439
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.439
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.436
sr13567 Sporisorium reilianum sr13567 I 0.436
SERLA73DRAFT_187779 Serpula lacrymans SERLA73DRAFT_187779 I 0.436
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.434
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.431
WALSEDRAFT_53977 Wallemia sebi WALSEDRAFT_53977 I 0.431
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.431
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.431
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.429
29701.m000600 Ricinus communis 29701.m000600 I 0.429
Gorai.006G181900 Gossypium raimondii Gorai.006G181900 I 0.429
Ciclev10012868m.g Citrus clementina Ciclev10012868m.g I 0.429
gw1.9.300.1 Sporobolomyces roseus gw1.9.300.1 I 0.429
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.428
Cucsa.067200 Cucumis sativus Cucsa.067200 I 0.428
Cla018386 Citrullus lanatus Cla018386 I 0.428
AWRI1499_3752 Brettanomyces bruxellensis AWRI1499_3752 I 0.428
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.427
Bra033055 Brassica rapa Bra033055 N 0.426
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.425
PV09_01265 Verruconis gallopava PV09_01265 I 0.425
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.425
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.424
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.424
CBF61859.1 Babesia bovis CBF61859.1 I 0.422
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.422
CBF61316.1 Babesia bovis CBF61316.1 I 0.422
CBF82108.1 Babesia bovis CBF82108.1 I 0.422
CBF60306.1 Babesia bovis CBF60306.1 I 0.422
Pm002934 Prunus mume Pm002934 I 0.422
Gorai.002G263800 Gossypium raimondii Gorai.002G263800 I 0.422
AAA27799.1 Babesia bovis AAA27799.1 I 0.422
CBU86344.1 Babesia bovis CBU86344.1 I 0.422
CBU85550.1 Babesia bovis CBU85550.1 I 0.422
EDO05788.1 Babesia bovis EDO05788.1 I 0.422
A1O3_03664 Capronia epimyces A1O3_03664 I 0.422
PRUPE_ppa007518mg Prunus persica PRUPE_ppa007518mg I 0.422
CBU86735.1 Babesia bovis CBU86735.1 I 0.422
CBV00234.1 Babesia bovis CBV00234.1 I 0.422
TRV_07738 Trichophyton verrucosum TRV_07738 I 0.421
MCYG_05548 Microsporum canis MCYG_05548 I 0.421
TESG_06912 Trichophyton tonsurans TESG_06912 I 0.421
ARB_02895 Arthroderma benhamiae ARB_02895 I 0.421
H105_01968 Trichophyton soudanense H105_01968 I 0.421
H102_01953 Trichophyton rubrum H102_01953 I 0.421
MCYG_05548 Arthroderma otae MCYG_05548 I 0.421
UV8b_6830 Ustilaginoidea virens UV8b_6830 I 0.420
EMIHUDRAFT_252069 Emiliania huxleyi EMIHUDRAFT_252069 N 0.420
e_gw1.1.2450.1 Mucor circinelloides e_gw1.1.2450.1 I 0.420
PVAR5_3907 Byssochlamys spectabilis PVAR5_3907 I 0.419
29822.m003476 Ricinus communis 29822.m003476 I 0.419
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.419
Thaps6683 Thalassiosira pseudonana Thaps6683 I 0.418
M7I_4892 Glarea lozoyensis M7I_4892 I 0.416
MAPG_02686 Magnaporthe poae MAPG_02686 I 0.416
fgenesh3_kg.24__2__378_3_CCSY Neurospora discreta fgenesh3_kg.24__2__378_3_CCSY I 0.416
HMPREF1120_01828 Exophiala dermatitidis HMPREF1120_01828 I 0.416
PV05_08806 Exophiala xenobiotica PV05_08806 I 0.416
PV06_10198 Exophiala oligosperma PV06_10198 I 0.416
Z519_01307 Cladophialophora bantiana Z519_01307 I 0.416
Z518_06904 Rhinocladiella mackenziei Z518_06904 I 0.416
MYCTH_2296547 Myceliophthora thermophila MYCTH_2296547 I 0.416
A1O5_02172 Cladophialophora psammophila A1O5_02172 I 0.416
NEUTE1DRAFT_118965 Neurospora tetrasperma NEUTE1DRAFT_118965 I 0.416
A1O7_07623 Cladophialophora yegresii A1O7_07623 I 0.416
fgenesh1_pg.00866_#_414 Aspergillus carbonarius fgenesh1_pg.00866_#_414 I 0.416
THITE_126111 Thielavia terrestris THITE_126111 I 0.416
Z517_03232 Fonsecaea pedrosoi Z517_03232 I 0.416
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.416
BBA_04234 Beauveria bassiana BBA_04234 I 0.416
PV08_09792 Exophiala spinifera PV08_09792 I 0.416
UREG_07427 Uncinocarpus reesii UREG_07427 I 0.416
NCU09995 Neurospora crassa NCU09995 I 0.416
G647_02460 Cladophialophora carrionii G647_02460 I 0.416
V499_06692 Pseudogymnoascus pannorum V499_06692 I 0.416
PV04_08099 Capronia semiimmersa PV04_08099 I 0.416
CIMG_03667 Coccidioides immitis CIMG_03667 I 0.416
CPC735_006120 Coccidioides posadasii CPC735_006120 I 0.416
CHGG_02718 Chaetomium globosum CHGG_02718 I 0.416
PODANS_1_14230 Podospora anserina PODANS_1_14230 I 0.416
GMDG_00086 Pseudogymnoascus destructans GMDG_00086 I 0.416
GGTG_09659 Gaeumannomyces graminis GGTG_09659 I 0.416
AFUA_3G11610 Aspergillus fumigatus CADAFUAG00005351 I 0.416
NFIA_065700 Neosartorya fischeri CADNFIAG00006255 I 0.416
CCM_02275 Cordyceps militaris CCM_02275 I 0.416
CANTEDRAFT_110112 Candida tenuis CANTEDRAFT_110112 I 0.416
PV07_11822 Cladophialophora immunda PV07_11822 I 0.416
UHOR_03854 Ustilago hordei UHOR_03854 I 0.415