|
HHAL004749-PA
(Halyomorpha halys)
Sox
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00505 (HMG_box) |
IPR000910 |
HHAL004749-PA |
T334847_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
sem-2
M02488_2.00 |
Caenorhabditis elegans |
NNNHVNNNNN |
NNNNNBDNNN |
PBM
Weirauch et al.(2014)
pTH9043
|
0.638
|
0.768
|
SOX4
M01026_2.00 |
Homo sapiens |
AACAAWGR |
YCWTTGTT |
PBM
Scharer et al.(2009)
Sox4
|
0.597
|
0.754
|
Sox4
M00213_2.00 |
Mus musculus |
NNVACAAWD |
HWTTGTBNN |
PBM
Badis et al.(2009)
Sox4_2941
|
0.597
|
0.754
|
SOX4
M03496_2.00 |
Homo sapiens |
NAACAATTKCAGTGTT |
AACACTGMAATTGTTN |
SELEX
Jolma et al.(2013)
SOX4_1
|
0.597
|
0.754
|
SOX4
M05765_2.00 |
Homo sapiens |
NRACAAWGVV |
BBCWTTGTYN |
SELEX
Yin et al.(2017)
SOX4_eDBD_HT-SELEX
|
0.597
|
0.754
|
SOX4
M09388_2.00 |
Homo sapiens |
BYCTTTGTYYBB |
VVRRACAAAGRV |
Misc
Kulakovskiy et al.(2013)
SOX4_HUMAN.H11MO.0.B
|
0.597
|
0.754
|
Sox4
M09410_2.00 |
Mus musculus |
BYCTTTGTYYBB |
VVRRACAAAGRV |
Misc
Kulakovskiy et al.(2013)
SOX4_MOUSE.H11MO.0.A
|
0.597
|
0.754
|
Sox4
M09641_2.00 |
Mus musculus |
BCWTTGTYCN |
NGRACAAWGV |
Misc
Heinz et al.(2010)
proB-Sox4_GSE50066
|
0.597
|
0.754
|
SOX4
M11301_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX4_Q3
|
0.597
|
0.754
|
SOX4
M11302_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX4_Q5_02
|
0.597
|
0.754
|
SOX4
M11303_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX4_Q5
|
0.597
|
0.754
|
SOX4
M05766_2.00 |
Homo sapiens |
NRACAAWGVV |
BBCWTTGTYN |
SELEX
Yin et al.(2017)
SOX4_eDBD_Methyl-HT-SELEX
|
0.597
|
0.754
|
Sox11
M00210_2.00 |
Mus musculus |
WTTGTBNNN |
NNNVACAAW |
PBM
Badis et al.(2009)
Sox11_2266
|
0.597
|
0.725
|
Sox11
M03541_2.00 |
Mus musculus |
AACAATTKCAGTGTT |
AACACTGMAATTGTT |
SELEX
Jolma et al.(2013)
Sox11_1
|
0.597
|
0.725
|
SOX11
M11326_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX11_Q6
|
0.597
|
0.725
|
Sox15
M03973_2.00 |
Drosophila melanogaster |
WYTGTTCGGTD |
HACCGAACARW |
SELEX
Nitta et al.(2015)
Sox15_1
|
0.594
|
0.594
|
Sox15
M03974_2.00 |
Drosophila melanogaster |
VACAATDNCATTGTN |
NACAATGNHATTGTB |
SELEX
Nitta et al.(2015)
Sox15_2
|
0.594
|
0.594
|
Sox15
M06450_2.00 |
Drosophila melanogaster |
RWACAATR |
YATTGTWY |
B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613
|
0.594
|
0.594
|
Sox14
M03971_2.00 |
Drosophila melanogaster |
BTGTWCGGTR |
YACCGWACAV |
SELEX
Nitta et al.(2015)
Sox14_1
|
0.591
|
0.681
|
Sox14
M03972_2.00 |
Drosophila melanogaster |
VACAATDNCATTGTB |
VACAATGNHATTGTB |
SELEX
Nitta et al.(2015)
Sox14_2
|
0.591
|
0.681
|
Sox14
M06449_2.00 |
Drosophila melanogaster |
VYYCTTTGTYC |
GRACAAAGRRB |
B1H
Zhu et al.(2011)
Sox14_SANGER_10_FBgn0005612
|
0.591
|
0.681
|
Sox21b
M03983_2.00 |
Drosophila melanogaster |
NAACAMTWNCAKTGTTB |
VAACAMTGNWAKTGTTN |
SELEX
Nitta et al.(2015)
Sox21b_1
|
0.575
|
0.681
|
Sox12
M00205_2.00 |
Mus musculus |
HWTTGTBNNN |
NNNVACAAWD |
PBM
Badis et al.(2009)
Sox12_3957
|
0.565
|
0.667
|
SOX12
M05789_2.00 |
Homo sapiens |
NATTGTTCGGK |
MCCGAACAATN |
SELEX
Yin et al.(2017)
SOX12_eDBD_HT-SELEX
|
0.565
|
0.667
|
SOX12
M05790_2.00 |
Homo sapiens |
YATTGTTCBKT |
AMVGAACAATR |
SELEX
Yin et al.(2017)
SOX12_eDBD_Methyl-HT-SELEX
|
0.565
|
0.667
|
Sox21
M00208_2.00 |
Mus musculus |
WTTVWNNNN |
NNNNWBAAW |
PBM
Badis et al.(2009)
Sox21_3417
|
0.564
|
0.638
|
SOX21
M03497_2.00 |
Homo sapiens |
AACAATKKYAKTGTT |
AACAMTRMMATTGTT |
SELEX
Jolma et al.(2013)
SOX21_1
|
0.564
|
0.638
|
SOX21
M03498_2.00 |
Homo sapiens |
AACAATRKDYAKTGTT |
AACAMTRHMYATTGTT |
SELEX
Jolma et al.(2013)
SOX21_2
|
0.564
|
0.638
|
SOX21
M03499_2.00 |
Homo sapiens |
TCAATGDYAKTGA |
TCAMTRHCATTGA |
SELEX
Jolma et al.(2013)
SOX21_3
|
0.564
|
0.638
|
SOX21
M03500_2.00 |
Homo sapiens |
TGAATGKYAKTCA |
TGAMTRMCATTCA |
SELEX
Jolma et al.(2013)
SOX21_4
|
0.564
|
0.638
|
Sox5
M00203_2.00 |
Mus musculus |
ATTGTBNN |
NNVACAAT |
PBM
Badis et al.(2009)
Sox5_3459
|
0.558
|
0.594
|
Sox13
M00212_2.00 |
Mus musculus |
RAACAATW |
WATTGTTY |
PBM
Badis et al.(2009)
Sox13_1718
|
0.558
|
0.594
|
SOX5
M05894_2.00 |
Homo sapiens |
DVACAATRVN |
NBYATTGTBH |
SMiLE-seq
Isakova et al.(2017)
SOX5
|
0.558
|
0.594
|
Sox5
M02719_2.00 |
Mus musculus |
NAACAAT |
ATTGTTN |
SELEX
Mathelier et al.(2014)
MA0087.1
|
0.558
|
0.594
|
SOX13
M08166_2.00 |
Homo sapiens |
NNACAATGVNN |
NNBCATTGTNN |
ChIP-seq
Mathelier et al.(2014)
MA1120.1
|
0.558
|
0.594
|
SOX5
M09390_2.00 |
Homo sapiens |
NAACAATN |
NATTGTTN |
Misc
Kulakovskiy et al.(2013)
SOX5_HUMAN.H11MO.0.C
|
0.558
|
0.594
|
Sox5
M09404_2.00 |
Mus musculus |
NAACAATN |
NATTGTTN |
Misc
Kulakovskiy et al.(2013)
SOX5_MOUSE.H11MO.0.C
|
0.558
|
0.594
|
SOX5
M11309_2.00 |
Homo sapiens |
NNAACAATNN |
NNATTGTTNN |
Transfac
Matys et al.(2006)
V$SOX5_01
|
0.558
|
0.594
|
SOX5
M11310_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX5_Q5
|
0.558
|
0.594
|
Sox6
M00828_2.00 |
Mus musculus |
WTTGTNNNN |
NNNNACAAW |
PBM
Weirauch et al.(2013)
pTH3862
|
0.551
|
0.565
|
SOX6
M05892_2.00 |
Homo sapiens |
DRACAATRVN |
NBYATTGTYH |
SMiLE-seq
Isakova et al.(2017)
SOX6
|
0.551
|
0.565
|
Sox6
M08169_2.00 |
Mus musculus |
BCWTTGTYYY |
RRRACAAWGV |
ChIP-seq
Mathelier et al.(2014)
MA0515.1
|
0.551
|
0.565
|
Sox6
M09640_2.00 |
Mus musculus |
BHWTTGTBNN |
NNVACAAWDV |
Misc
Heinz et al.(2010)
Myotubes-Sox6_GSE32627
|
0.551
|
0.565
|
SOX6
M11300_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX6_Q5
|
0.551
|
0.565
|
Sox7
M00209_2.00 |
Mus musculus |
NNNWBAAT |
ATTVWNNN |
PBM
Badis et al.(2009)
Sox7_3460
|
0.548
|
0.594
|
SOX7
M03516_2.00 |
Homo sapiens |
AACAATRDNHAKTGTT |
AACAMTDNHYATTGTT |
SELEX
Jolma et al.(2013)
SOX7_1
|
0.548
|
0.594
|
SOX7
M03517_2.00 |
Homo sapiens |
DAACAATKDYAKTGTTN |
NAACAMTRHMATTGTTH |
SELEX
Jolma et al.(2013)
SOX7_2
|
0.548
|
0.594
|
SOX7
M03518_2.00 |
Homo sapiens |
NATGAATKDCAKTCATN |
NATGAMTGHMATTCATN |
SELEX
Jolma et al.(2013)
SOX7_3
|
0.548
|
0.594
|
SOX7
M05787_2.00 |
Homo sapiens |
ACAATDNHATTGT |
ACAATDNHATTGT |
SELEX
Yin et al.(2017)
SOX7_eDBD_HT-SELEX
|
0.548
|
0.594
|
SOX7
M11325_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX7_Q2
|
0.548
|
0.594
|
SOX7
M05788_2.00 |
Homo sapiens |
ACAATDNHATTGT |
ACAATDNHATTGT |
SELEX
Yin et al.(2017)
SOX7_eDBD_Methyl-HT-SELEX
|
0.548
|
0.594
|
Sox3
M00827_2.00 |
Mus musculus |
WDTVHNNN |
NNNDBAHW |
PBM
Weirauch et al.(2013)
pTH3087
|
0.546
|
0.623
|
Sox3
M03538_2.00 |
Mus musculus |
RAACAATRNYATTGTTK |
MAACAATRNYATTGTTY |
SELEX
Jolma et al.(2013)
Sox3_1
|
0.546
|
0.623
|
Sox3
M03539_2.00 |
Mus musculus |
BATCAATGBYATTGATD |
HATCAATRVCATTGATV |
SELEX
Jolma et al.(2013)
Sox3_2
|
0.546
|
0.623
|
Sox3
M03540_2.00 |
Mus musculus |
DATGAATKNYATTCATR |
YATGAATRNMATTCATH |
SELEX
Jolma et al.(2013)
Sox3_3
|
0.546
|
0.623
|
SOX3
M05769_2.00 |
Homo sapiens |
VYATTKTNVS |
SBNAMAATRB |
SELEX
Yin et al.(2017)
SOX3_FL_HT-SELEX
|
0.546
|
0.623
|
Sox3
M08168_2.00 |
Mus musculus |
CCTTTGTYYB |
VRRACAAAGG |
ChIP-seq
Mathelier et al.(2014)
MA0514.1
|
0.546
|
0.623
|
SOX3
M09391_2.00 |
Homo sapiens |
BYCWTTGTBYB |
VRVACAAWGRV |
Misc
Kulakovskiy et al.(2013)
SOX3_HUMAN.H11MO.0.B
|
0.546
|
0.623
|
Sox3
M09405_2.00 |
Mus musculus |
VRVACAAWGGV |
BCCWTTGTBYB |
Misc
Kulakovskiy et al.(2013)
SOX3_MOUSE.H11MO.0.C
|
0.546
|
0.623
|
Sox3
M09639_2.00 |
Mus musculus |
VACAAWRG |
CYWTTGTB |
Misc
Heinz et al.(2010)
NPC-Sox3_GSE33059
|
0.546
|
0.623
|
SOX3
M05770_2.00 |
Homo sapiens |
BYATTGTBNN |
NNVACAATRV |
SELEX
Yin et al.(2017)
SOX3_FL_Methyl-HT-SELEX
|
0.546
|
0.623
|
D
M03969_2.00 |
Drosophila melanogaster |
AMVGAACAAT |
ATTGTTCBKT |
SELEX
Nitta et al.(2015)
D_1
|
0.541
|
0.623
|
D
M03970_2.00 |
Drosophila melanogaster |
NAACAATDNCATTGTTN |
NAACAATGNHATTGTTN |
SELEX
Nitta et al.(2015)
D_2
|
0.541
|
0.623
|
D
M06559_2.00 |
Drosophila melanogaster |
BCYWTTGTTNT |
ANAACAAWRGV |
B1H
Mathelier et al.(2014)
MA0445.1
|
0.541
|
0.623
|
D
M06448_2.00 |
Drosophila melanogaster |
BCYATTGTYNW |
WNRACAATRGV |
B1H
Zhu et al.(2011)
D_NAR_FBgn0000411
|
0.541
|
0.623
|
D
M09694_2.00 |
Drosophila melanogaster |
RACAAWRGVH |
DBCYWTTGTY |
Misc
Kulakovskiy et al.(2009)
D
|
0.541
|
0.623
|
Sox15
M00202_2.00 |
Mus musculus |
WTTVWNNNN |
NNNNWBAAW |
PBM
Badis et al.(2009)
Sox15_3457
|
0.540
|
0.594
|
SOX15
M03508_2.00 |
Homo sapiens |
AACAATAMCATTGTT |
AACAATGKTATTGTT |
SELEX
Jolma et al.(2013)
SOX15_1
|
0.540
|
0.594
|
SOX15
M03509_2.00 |
Homo sapiens |
ATCAATAMCATTGAT |
ATCAATGKTATTGAT |
SELEX
Jolma et al.(2013)
SOX15_2
|
0.540
|
0.594
|
SOX15
M03510_2.00 |
Homo sapiens |
ATGAATAACATTCAT |
ATGAATGTTATTCAT |
SELEX
Jolma et al.(2013)
SOX15_3
|
0.540
|
0.594
|
SOX15
M05893_2.00 |
Homo sapiens |
YYWTTGTNHN |
NDNACAAWRR |
SMiLE-seq
Isakova et al.(2017)
SOX15
|
0.540
|
0.594
|
SOX15
M11308_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX15_Q3
|
0.540
|
0.594
|
SRY
M03525_2.00 |
Homo sapiens |
AACAATANCATTGTT |
AACAATGNTATTGTT |
SELEX
Jolma et al.(2013)
SRY_1
|
0.539
|
0.551
|
SRY
M03526_2.00 |
Homo sapiens |
AACAATHHNCATTGTT |
AACAATGNDDATTGTT |
SELEX
Jolma et al.(2013)
SRY_2
|
0.539
|
0.551
|
SRY
M03527_2.00 |
Homo sapiens |
TCAATAMCATTGA |
TCAATGKTATTGA |
SELEX
Jolma et al.(2013)
SRY_3
|
0.539
|
0.551
|
SRY
M03528_2.00 |
Homo sapiens |
TGAATANCATTCA |
TGAATGNTATTCA |
SELEX
Jolma et al.(2013)
SRY_4
|
0.539
|
0.551
|
SRY
M05898_2.00 |
Homo sapiens |
NACAATNV |
BNATTGTN |
SMiLE-seq
Isakova et al.(2017)
SRY
|
0.539
|
0.551
|
SRY
M02717_2.00 |
Homo sapiens |
NDWAACAAW |
WTTGTWWHN |
SELEX
Mathelier et al.(2014)
MA0084.1
|
0.539
|
0.551
|
SRY
M09398_2.00 |
Homo sapiens |
BWTTGTTWH |
DWAACAAWV |
Misc
Kulakovskiy et al.(2013)
SRY_HUMAN.H11MO.0.B
|
0.539
|
0.551
|
SRY
M11331_2.00 |
Homo sapiens |
AAWSWMM |
KKWSWTT |
Transfac
Matys et al.(2006)
V$SRY_01
|
0.539
|
0.551
|
SRY
M11332_2.00 |
Homo sapiens |
HBHWTTGTTWDN |
NHWAACAAWDVD |
Transfac
Matys et al.(2006)
V$SRY_02
|
0.539
|
0.551
|
SRY
M11333_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SRY_Q6
|
0.539
|
0.551
|
Sox17
M00199_2.00 |
Mus musculus |
NNNNWSAAT |
ATTSWNNNN |
PBM
Badis et al.(2009)
Sox17_2837
|
0.538
|
0.594
|
Sox17
M03533_2.00 |
Mus musculus |
AACAATWDCATTGTT |
AACAATGHWATTGTT |
SELEX
Jolma et al.(2013)
Sox17_1
|
0.538
|
0.594
|
Sox17
M03534_2.00 |
Mus musculus |
ATGAATWNCATTCAT |
ATGAATGNWATTCAT |
SELEX
Jolma et al.(2013)
Sox17_2
|
0.538
|
0.594
|
SOX17
M05896_2.00 |
Homo sapiens |
DRACAATRVN |
NBYATTGTYH |
SMiLE-seq
Isakova et al.(2017)
SOX17
|
0.538
|
0.594
|
Sox17
M02718_2.00 |
Mus musculus |
SACAATRNN |
NNYATTGTS |
SELEX
Mathelier et al.(2014)
MA0078.1
|
0.538
|
0.594
|
Sox17
M08040_2.00 |
Mus musculus |
RVACAAWRRVN |
NBYYWTTGTBY |
ChIP-seq
Chen et al.(2011)
GSE19026_Sox17_XENcells
|
0.538
|
0.594
|
SOX17
M09396_2.00 |
Homo sapiens |
BCCATTKTNBN |
NVNAMAATGGV |
Misc
Kulakovskiy et al.(2013)
SOX17_HUMAN.H11MO.0.C
|
0.538
|
0.594
|
SOX17
M11323_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX17_01
|
0.538
|
0.594
|
SOX17
M11324_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX17_Q2
|
0.538
|
0.594
|
Sox21a
M03978_2.00 |
Drosophila melanogaster |
NMACAMTAVCATTGTKN |
NMACAATGBTAKTGTKN |
SELEX
Nitta et al.(2015)
Sox21a_1
|
0.537
|
0.638
|
Sox21a
M03979_2.00 |
Drosophila melanogaster |
NNACAMTANCATTGTYH |
DRACAATGNTAKTGTNN |
SELEX
Nitta et al.(2015)
Sox21a_2
|
0.537
|
0.638
|
Sox14
M00829_2.00 |
Mus musculus |
NAACAATD |
HATTGTTN |
PBM
Weirauch et al.(2013)
pTH2677
|
0.531
|
0.609
|
Sox14
M00206_2.00 |
Mus musculus |
NNNABAAW |
WTTVTNNN |
PBM
Badis et al.(2009)
Sox14_2677
|
0.531
|
0.609
|
SOX14
M03513_2.00 |
Homo sapiens |
ACAMTAMCATTG |
CAATGKTAKTGT |
SELEX
Jolma et al.(2013)
SOX14_1
|
0.531
|
0.609
|
SOX14
M03514_2.00 |
Homo sapiens |
NTGAATANCATTCAN |
NTGAATGNTATTCAN |
SELEX
Jolma et al.(2013)
SOX14_2
|
0.531
|
0.609
|
SOX14
M03515_2.00 |
Homo sapiens |
TCAATWVCATTGA |
TCAATGBWATTGA |
SELEX
Jolma et al.(2013)
SOX14_3
|
0.531
|
0.609
|
SOX14
M05783_2.00 |
Homo sapiens |
NYATTGWNNN |
NNNWCAATRN |
SELEX
Yin et al.(2017)
SOX14_eDBD_HT-SELEX
|
0.531
|
0.609
|
SOX14
M05785_2.00 |
Homo sapiens |
NCGAACAATK |
MATTGTTCGN |
SELEX
Yin et al.(2017)
SOX14_FL_HT-SELEX
|
0.531
|
0.609
|
SOX14
M05784_2.00 |
Homo sapiens |
NYATTGTNNN |
NNNACAATRN |
SELEX
Yin et al.(2017)
SOX14_eDBD_Methyl-HT-SELEX
|
0.531
|
0.609
|
SOX14
M05786_2.00 |
Homo sapiens |
NATTGTTYGB |
VCRAACAATN |
SELEX
Yin et al.(2017)
SOX14_FL_Methyl-HT-SELEX
|
0.531
|
0.609
|
SOX2
M03519_2.00 |
Homo sapiens |
DAACAATGKYAKTGTTN |
NAACAMTRMCATTGTTH |
SELEX
Jolma et al.(2013)
SOX2_1
|
0.530
|
0.609
|
SOX2
M03520_2.00 |
Homo sapiens |
VTGAATGDYATTCAN |
NTGAATRHCATTCAB |
SELEX
Jolma et al.(2013)
SOX2_2
|
0.530
|
0.609
|
SOX2
M03521_2.00 |
Homo sapiens |
NATCAATGNYATTGAWD |
HWTCAATRNCATTGATN |
SELEX
Jolma et al.(2013)
SOX2_3
|
0.530
|
0.609
|
SOX2
M03522_2.00 |
Homo sapiens |
NAACAATANCATTGTTH |
DAACAATGNTATTGTTN |
SELEX
Jolma et al.(2013)
SOX2_4
|
0.530
|
0.609
|
SOX2
M03523_2.00 |
Homo sapiens |
HATCAATANCATTGATH |
DATCAATGNTATTGATD |
SELEX
Jolma et al.(2013)
SOX2_5
|
0.530
|
0.609
|
SOX2
M03524_2.00 |
Homo sapiens |
DTGAATWNCATTCAH |
DTGAATGNWATTCAH |
SELEX
Jolma et al.(2013)
SOX2_6
|
0.530
|
0.609
|
SoxN
M03976_2.00 |
Drosophila melanogaster |
VYGHACARTNN |
NNAYTGTDCRB |
SELEX
Nitta et al.(2015)
SoxN_1
|
0.530
|
0.609
|
SoxN
M03977_2.00 |
Drosophila melanogaster |
NCAATNVCATTGN |
NCAATGBNATTGN |
SELEX
Nitta et al.(2015)
SoxN_2
|
0.530
|
0.609
|
SOX2
M05897_2.00 |
Homo sapiens |
NACAAWRRNN |
NNYYWTTGTN |
SMiLE-seq
Isakova et al.(2017)
SOX2
|
0.530
|
0.609
|
Sox2
M08170_2.00 |
Mus musculus |
CCWTTGTB |
VACAAWGG |
ChIP-seq
Mathelier et al.(2014)
MA0143.3
|
0.530
|
0.609
|
Sox2
M08041_2.00 |
Mus musculus |
WHWRMADNACAAWRR |
YYWTTGTNHTKYWDW |
ChIP-seq
Chen et al.(2011)
SRP000217_Sox2
|
0.530
|
0.609
|
Sox2
M08042_2.00 |
Mus musculus |
TTWRCATNWSAAWRV |
BYWTTSWNATGYWAA |
ChIP-seq
Chen et al.(2011)
SRP000712_Sox2
|
0.530
|
0.609
|
SOX2
M09397_2.00 |
Homo sapiens |
BBYYWTTGTBYBB |
VVRVACAAWRRVV |
Misc
Kulakovskiy et al.(2013)
SOX2_HUMAN.H11MO.0.A
|
0.530
|
0.609
|
Sox2
M09409_2.00 |
Mus musculus |
THWRCATNACAAWRRV |
BYYWTTGTNATGYWDA |
Misc
Kulakovskiy et al.(2013)
SOX2_MOUSE.H11MO.0.A
|
0.530
|
0.609
|
SOX2
M11327_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX2_Q3_01
|
0.530
|
0.609
|
SOX2
M11328_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX2_Q3
|
0.530
|
0.609
|
SOX2
M11329_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX2_Q4
|
0.530
|
0.609
|
SOX2
M11330_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX2_Q6
|
0.530
|
0.609
|
Sox1
M00214_2.00 |
Mus musculus |
NNNNNWBAAW |
WTTVWNNNNN |
PBM
Badis et al.(2009)
Sox1_2631
|
0.530
|
0.594
|
Sox1
M03542_2.00 |
Mus musculus |
VACAATWNCATTGTT |
AACAATGNWATTGTB |
SELEX
Jolma et al.(2013)
Sox1_1
|
0.530
|
0.594
|
Sox1
M03543_2.00 |
Mus musculus |
NTGAATWNCATTCAN |
NTGAATGNWATTCAN |
SELEX
Jolma et al.(2013)
Sox1_2
|
0.530
|
0.594
|
Sox1
M03544_2.00 |
Mus musculus |
TCAATWNCATTGA |
TCAATGNWATTGA |
SELEX
Jolma et al.(2013)
Sox1_3
|
0.530
|
0.594
|
Sox1
M03545_2.00 |
Mus musculus |
TGAATDDNHATTCA |
TGAATDNHHATTCA |
SELEX
Jolma et al.(2013)
Sox1_4
|
0.530
|
0.594
|
Sox10
M00826_2.00 |
Mus musculus |
NNNNWBAAT |
ATTVWNNNN |
PBM
Weirauch et al.(2013)
pTH1729
|
0.526
|
0.609
|
SOX10
M03491_2.00 |
Homo sapiens |
AACAATTKCAGTGTT |
AACACTGMAATTGTT |
SELEX
Jolma et al.(2013)
SOX10_1
|
0.526
|
0.609
|
SOX10
M03492_2.00 |
Homo sapiens |
AACAATRTKCAGTGTT |
AACACTGMAYATTGTT |
SELEX
Jolma et al.(2013)
SOX10_2
|
0.526
|
0.609
|
SOX10
M03493_2.00 |
Homo sapiens |
ATCAATTKCAGTGAT |
ATCACTGMAATTGAT |
SELEX
Jolma et al.(2013)
SOX10_3
|
0.526
|
0.609
|
SOX10
M03494_2.00 |
Homo sapiens |
ATGAATTKCAGTCAT |
ATGACTGMAATTCAT |
SELEX
Jolma et al.(2013)
SOX10_4
|
0.526
|
0.609
|
SOX10
M03495_2.00 |
Homo sapiens |
TGAATGTKCAGTCA |
TGACTGMACATTCA |
SELEX
Jolma et al.(2013)
SOX10_5
|
0.526
|
0.609
|
Sox10
M03535_2.00 |
Mus musculus |
AACAATTKCAGTGTT |
AACACTGMAATTGTT |
SELEX
Jolma et al.(2013)
Sox10_1
|
0.526
|
0.609
|
Sox10
M03536_2.00 |
Mus musculus |
ATCAATTKCAGTGAT |
ATCACTGMAATTGAT |
SELEX
Jolma et al.(2013)
Sox10_2
|
0.526
|
0.609
|
Sox10
M03537_2.00 |
Mus musculus |
ATGAATTDCAGTCAT |
ATGACTGHAATTCAT |
SELEX
Jolma et al.(2013)
Sox10_3
|
0.526
|
0.609
|
SOX10
M05759_2.00 |
Homo sapiens |
AACAATRNNNYATTGTT |
AACAATRNNNYATTGTT |
SELEX
Yin et al.(2017)
SOX10_eDBD_HT-SELEX
|
0.526
|
0.609
|
SOX10
M05761_2.00 |
Homo sapiens |
NACAATRVNNBYATTGTN |
NACAATRVNNBYATTGTN |
SELEX
Yin et al.(2017)
SOX10_FL_HT-SELEX
|
0.526
|
0.609
|
SOX10
M05891_2.00 |
Homo sapiens |
BBCWWTGTTH |
DAACAWWGVV |
SMiLE-seq
Isakova et al.(2017)
SOX10
|
0.526
|
0.609
|
SOX10
M08165_2.00 |
Homo sapiens |
NNVACAAAGVN |
NBCTTTGTBNN |
ChIP-seq
Mathelier et al.(2014)
MA0442.2
|
0.526
|
0.609
|
SOX10
M09387_2.00 |
Homo sapiens |
VAADRVVNBCWTTGTN |
NACAAWGVNBBYHTTB |
Misc
Kulakovskiy et al.(2013)
SOX10_HUMAN.H11MO.0.B
|
0.526
|
0.609
|
Sox10
M09403_2.00 |
Mus musculus |
VAADRVVNBCWTTGTN |
NACAAWGVNBBYHTTB |
Misc
Kulakovskiy et al.(2013)
SOX10_MOUSE.H11MO.0.B
|
0.526
|
0.609
|
SOX10
M11296_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX10_Q3
|
0.526
|
0.609
|
SOX10
M11297_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX10_Q6_01
|
0.526
|
0.609
|
SOX10
M11298_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX10_Q6
|
0.526
|
0.609
|
SOX10
M05760_2.00 |
Homo sapiens |
AACAATRSNSYATTGTT |
AACAATRSNSYATTGTT |
SELEX
Yin et al.(2017)
SOX10_eDBD_Methyl-HT-SELEX
|
0.526
|
0.609
|
SOX10
M05762_2.00 |
Homo sapiens |
NACAATRVNNBYATTGTN |
NACAATRVNNBYATTGTN |
SELEX
Yin et al.(2017)
SOX10_FL_Methyl-HT-SELEX
|
0.526
|
0.609
|
Sox8
M00197_2.00 |
Mus musculus |
NNNWBAAT |
ATTVWNNN |
PBM
Badis et al.(2009)
Sox8_1733
|
0.526
|
0.594
|
SOX8
M03483_2.00 |
Homo sapiens |
AACAATRTGCAGTGTT |
AACACTGCAYATTGTT |
SELEX
Jolma et al.(2013)
SOX8_1
|
0.526
|
0.594
|
SOX8
M03484_2.00 |
Homo sapiens |
ATGAATTKCAGTC |
GACTGMAATTCAT |
SELEX
Jolma et al.(2013)
SOX8_2
|
0.526
|
0.594
|
SOX8
M03485_2.00 |
Homo sapiens |
RAACAATTKCAGTGTTN |
NAACACTGMAATTGTTY |
SELEX
Jolma et al.(2013)
SOX8_3
|
0.526
|
0.594
|
SOX8
M03486_2.00 |
Homo sapiens |
HATCAATTKCAGTGATN |
NATCACTGMAATTGATD |
SELEX
Jolma et al.(2013)
SOX8_4
|
0.526
|
0.594
|
SOX8
M03487_2.00 |
Homo sapiens |
TGAATRTKCAGTCA |
TGACTGMAYATTCA |
SELEX
Jolma et al.(2013)
SOX8_5
|
0.526
|
0.594
|
SOX8
M03488_2.00 |
Homo sapiens |
AACAATTDCAGTGTT |
AACACTGHAATTGTT |
SELEX
Jolma et al.(2013)
SOX8_6
|
0.526
|
0.594
|
SOX8
M03489_2.00 |
Homo sapiens |
ATGAATTKCAGTC |
GACTGMAATTCAT |
SELEX
Jolma et al.(2013)
SOX8_7
|
0.526
|
0.594
|
SOX8
M03490_2.00 |
Homo sapiens |
MATCAATTGCAGTGATK |
MATCACTGCAATTGATK |
SELEX
Jolma et al.(2013)
SOX8_8
|
0.526
|
0.594
|
SOX9
M03501_2.00 |
Homo sapiens |
DDACAATRV |
BYATTGTHH |
SELEX
Jolma et al.(2013)
SOX9_1
|
0.526
|
0.594
|
SOX9
M03502_2.00 |
Homo sapiens |
AACAATRTGCAGTGTT |
AACACTGCAYATTGTT |
SELEX
Jolma et al.(2013)
SOX9_2
|
0.526
|
0.594
|
SOX9
M03503_2.00 |
Homo sapiens |
ATCAATRTKCAGTGAT |
ATCACTGMAYATTGAT |
SELEX
Jolma et al.(2013)
SOX9_3
|
0.526
|
0.594
|
SOX9
M03504_2.00 |
Homo sapiens |
ATGAATRTKCAGTCAT |
ATGACTGMAYATTCAT |
SELEX
Jolma et al.(2013)
SOX9_4
|
0.526
|
0.594
|
SOX9
M03505_2.00 |
Homo sapiens |
RAACAATTKCAGTGTTH |
DAACACTGMAATTGTTY |
SELEX
Jolma et al.(2013)
SOX9_5
|
0.526
|
0.594
|
SOX9
M03506_2.00 |
Homo sapiens |
NATCAATKKYAGTGATN |
NATCACTRMMATTGATN |
SELEX
Jolma et al.(2013)
SOX9_6
|
0.526
|
0.594
|
SOX9
M03507_2.00 |
Homo sapiens |
NATGAATTKCAGTCATN |
NATGACTGMAATTCATN |
SELEX
Jolma et al.(2013)
SOX9_7
|
0.526
|
0.594
|
SOX8
M05749_2.00 |
Homo sapiens |
NDAACAATRV |
BYATTGTTHN |
SELEX
Yin et al.(2017)
SOX8_eDBD_HT-SELEX
|
0.526
|
0.594
|
SOX8
M05751_2.00 |
Homo sapiens |
ACAATRVNNBYATTGT |
ACAATRVNNBYATTGT |
SELEX
Yin et al.(2017)
SOX8_FL_HT-SELEX
|
0.526
|
0.594
|
SOX9
M05767_2.00 |
Homo sapiens |
HDAACAATRV |
BYATTGTTHD |
SELEX
Yin et al.(2017)
SOX9_eDBD_HT-SELEX
|
0.526
|
0.594
|
SOX9
M02716_2.00 |
Homo sapiens |
DAACAATRG |
CYATTGTTH |
SELEX
Mathelier et al.(2014)
MA0077.1
|
0.526
|
0.594
|
SOX9
M09389_2.00 |
Homo sapiens |
RMACAAWGVNNBYHTT |
AADRVNNBCWTTGTKY |
Misc
Kulakovskiy et al.(2013)
SOX9_HUMAN.H11MO.0.B
|
0.526
|
0.594
|
Sox9
M09399_2.00 |
Mus musculus |
RMACAAWGVNNBYHTT |
AADRVNNBCWTTGTKY |
Misc
Kulakovskiy et al.(2013)
SOX9_MOUSE.H11MO.0.A
|
0.526
|
0.594
|
SOX9
M11304_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX9_09
|
0.526
|
0.594
|
SOX9
M11305_2.00 |
Homo sapiens |
NNNDAACAATRRNN |
NNYYATTGTTHNNN |
Transfac
Matys et al.(2006)
V$SOX9_B1
|
0.526
|
0.594
|
SOX9
M11306_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX9_Q4
|
0.526
|
0.594
|
SOX9
M11307_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX9_Q5
|
0.526
|
0.594
|
SOX8
M05750_2.00 |
Homo sapiens |
BYATTGTTNN |
NNAACAATRV |
SELEX
Yin et al.(2017)
SOX8_eDBD_Methyl-HT-SELEX
|
0.526
|
0.594
|
SOX8
M05752_2.00 |
Homo sapiens |
ACAATRVNNBYATTGT |
ACAATRVNNBYATTGT |
SELEX
Yin et al.(2017)
SOX8_FL_Methyl-HT-SELEX
|
0.526
|
0.594
|
SOX9
M05768_2.00 |
Homo sapiens |
NNNACAATRS |
SYATTGTNNN |
SELEX
Yin et al.(2017)
SOX9_eDBD_Methyl-HT-SELEX
|
0.526
|
0.594
|
Sox18
M00204_2.00 |
Mus musculus |
NNNWBAAT |
ATTVWNNN |
PBM
Badis et al.(2009)
Sox18_3506
|
0.523
|
0.565
|
SOX18
M03529_2.00 |
Homo sapiens |
AACAATDNCATTGTT |
AACAATGNHATTGTT |
SELEX
Jolma et al.(2013)
SOX18_1
|
0.523
|
0.565
|
SOX18
M03530_2.00 |
Homo sapiens |
ATCAATWDCATTGAT |
ATCAATGHWATTGAT |
SELEX
Jolma et al.(2013)
SOX18_2
|
0.523
|
0.565
|
SOX18
M03531_2.00 |
Homo sapiens |
ATGAATWYCATTCAT |
ATGAATGRWATTCAT |
SELEX
Jolma et al.(2013)
SOX18_3
|
0.523
|
0.565
|
SOX18
M05791_2.00 |
Homo sapiens |
VACRAYGV |
BCRTYGTB |
SELEX
Yin et al.(2017)
SOX18_eDBD_HT-SELEX
|
0.523
|
0.565
|
SOX18
M11334_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX18_Q5_01
|
0.523
|
0.565
|
SOX18
M11335_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SOX18_Q5
|
0.523
|
0.565
|
SOX18
M05792_2.00 |
Homo sapiens |
BYATTGTN |
NACAATRV |
SELEX
Yin et al.(2017)
SOX18_eDBD_Methyl-HT-SELEX
|
0.523
|
0.565
|
Sox102F
M03981_2.00 |
Drosophila melanogaster |
ATTGTTCGGTGKN |
NMCACCGAACAAT |
SELEX
Nitta et al.(2015)
Sox102F_1
|
0.510
|
0.565
|
Sox102F
M03982_2.00 |
Drosophila melanogaster |
NAACAATDDCATTGTTN |
NAACAATGHHATTGTTN |
SELEX
Nitta et al.(2015)
Sox102F_2
|
0.510
|
0.565
|
egl-13
M00710_2.00 |
Caenorhabditis elegans |
NNAACAATWN |
NWATTGTTNN |
PBM
Narasimhan et al.(2015)
pTH9125
|
0.510
|
0.551
|
Sry
M00211_2.00 |
Mus musculus |
ATTRTNNNNN |
NNNNNAYAAT |
PBM
Badis et al.(2009)
Sry_2833
|
0.506
|
0.565
|
Sry
M09408_2.00 |
Mus musculus |
BWTTGTTWH |
DWAACAAWV |
Misc
Kulakovskiy et al.(2013)
SRY_MOUSE.H11MO.0.B
|
0.506
|
0.565
|
Sox30
M00201_2.00 |
Mus musculus |
ATTRTBNNNN |
NNNNVAYAAT |
PBM
Badis et al.(2009)
Sox30_2781
|
0.462
|
0.435
|
SOX30
M05753_2.00 |
Homo sapiens |
NRACAATN |
NATTGTYN |
SELEX
Yin et al.(2017)
SOX30_eDBD_HT-SELEX
|
0.462
|
0.435
|
SOX30
M05754_2.00 |
Homo sapiens |
BATTGTYN |
NRACAATV |
SELEX
Yin et al.(2017)
SOX30_eDBD_Methyl-HT-SELEX
|
0.462
|
0.435
|
ROX1
M00070_2.00 |
Saccharomyces cerevisiae |
NRAACAATWNN |
NNWATTGTTYN |
PBM
Badis et al.(2008)
ROX1_2099
|
0.453
|
0.377
|
ROX1
M07498_2.00 |
Saccharomyces cerevisiae |
YYHATTGTTYTS |
SARAACAATDRR |
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
|
0.453
|
0.377
|
ROX1
M08607_2.00 |
Saccharomyces cerevisiae |
BYATTGTN |
NACAATRV |
Misc
DeBoer et al.(2011)
YPR065W_1396
|
0.453
|
0.377
|
ROX1
M11346_2.00 |
Saccharomyces cerevisiae |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
|
0.453
|
0.377
|
ROX1
M11347_2.00 |
Saccharomyces cerevisiae |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
F$ROX1_Q6
|
0.453
|
0.377
|
mat1-Mc
M11340_2.00 |
Schizosaccharomyces pombe |
NRMNNAACAAAGAVRYMW |
AKRYBTCTTTGTTNNKYN |
Transfac
Matys et al.(2006)
F$MAT1MC_01
|
0.429
|
0.275
|
mat1-Mc
M11341_2.00 |
Schizosaccharomyces pombe |
YYHATTGTYD |
HRACAATDRR |
Transfac
Matys et al.(2006)
F$MAT1MC_02
|
0.429
|
0.275
|
For this family, TFs with SR scores > 0.415 will likely have a similar motif |