LCUP001585 (Lucilia cuprina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 LCUP001585 T334859_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox21b
M03983_2.00
Drosophila melanogaster
NAACAMTWNCAKTGTTB

VAACAMTGNWAKTGTTN
SELEX
Nitta et al.(2015)
Sox21b_1
0.445 0.973
D
M03969_2.00
Drosophila melanogaster
AMVGAACAAT

ATTGTTCBKT
SELEX
Nitta et al.(2015)
D_1
0.445 0.919
D
M03970_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN

NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
D_2
0.445 0.919
D
M06559_2.00
Drosophila melanogaster
BCYWTTGTTNT

ANAACAAWRGV
B1H
Mathelier et al.(2014)
MA0445.1
0.445 0.919
D
M06448_2.00
Drosophila melanogaster
BCYATTGTYNW

WNRACAATRGV
B1H
Zhu et al.(2011)
D_NAR_FBgn0000411
0.445 0.919
D
M09694_2.00
Drosophila melanogaster
RACAAWRGVH

DBCYWTTGTY
Misc
Kulakovskiy et al.(2009)
D
0.445 0.919
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP001585-PA Sox 267 303

Links

Other Sox family TFs
Other Lucilia cuprina TFs

274 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
M437DRAFT_86849 Aureobasidium melanogenum M437DRAFT_86849 I 0.000
MGU_07416 Metarhizium guizhouense MGU_07416 N 0.000
NechaG13140 Fusarium solani NechaG13140 N 0.000
OIDMADRAFT_166826 Oidiodendron maius OIDMADRAFT_166826 N 0.000
PCH_Pc21g04750 Penicillium rubens PCH_Pc21g04750 N 0.000
PVAR5_4539 Byssochlamys spectabilis PVAR5_4539 N 0.000
X797_010624 Metarhizium robertsii X797_010624 N 0.000
gw1.32.130.1 Nectria haematococca gw1.32.130.1 N 0.000
e_gw1.00609.213.1 Aspergillus carbonarius e_gw1.00609.213.1 N 0.000
AOL_s00215g294 Arthrobotrys oligospora AOL_s00215g294 N 0.000
MBR_01042 Metarhizium brunneum MBR_01042 N 0.000
H072_1536 Dactylellina haptotyla H072_1536 N 0.000
FPSE_08791 Fusarium pseudograminearum FPSE_08791 N 0.000
FGRRES_13830 Fusarium graminearum FGRRES_13830 N 0.000
NFIA_072500 Neosartorya fischeri CADNFIAG00006866 N 0.000
CADANGAG00004435 Aspergillus niger CADANGAG00004435 N 0.000
AFUA_5G14390 Aspergillus fumigatus CADAFUAG00006001 N 0.000
CADAFLAG00011506 Aspergillus flavus CADAFLAG00011506 N 0.000
ACLA_017280 Aspergillus clavatus CADACLAG00001327 N 0.000
Pc21g04750 Penicillium chrysogenum Pc21g04750 N 0.000