LCUP001585 (Lucilia cuprina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 LCUP001585 T334859_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox21b
M03983_2.00
Drosophila melanogaster
NAACAMTWNCAKTGTTB

VAACAMTGNWAKTGTTN
SELEX
Nitta et al.(2015)
Sox21b_1
0.445 0.973
D
M03969_2.00
Drosophila melanogaster
AMVGAACAAT

ATTGTTCBKT
SELEX
Nitta et al.(2015)
D_1
0.445 0.919
D
M03970_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN

NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
D_2
0.445 0.919
D
M06559_2.00
Drosophila melanogaster
BCYWTTGTTNT

ANAACAAWRGV
B1H
Mathelier et al.(2014)
MA0445.1
0.445 0.919
D
M06448_2.00
Drosophila melanogaster
BCYATTGTYNW

WNRACAATRGV
B1H
Zhu et al.(2011)
D_NAR_FBgn0000411
0.445 0.919
D
M09694_2.00
Drosophila melanogaster
RACAAWRGVH

DBCYWTTGTY
Misc
Kulakovskiy et al.(2009)
D
0.445 0.919
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP001585-PA Sox 267 303

Links

Other Sox family TFs
Other Lucilia cuprina TFs

274 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000792 Aedes aegypti AAEL000792 I 0.663
AAEL000893 Aedes aegypti AAEL000893 I 0.445
AALB009865 Anopheles albimanus AALB009865 I 0.583
AALB009868 Anopheles albimanus AALB009868 I 0.735
AALB009869 Anopheles albimanus AALB009869 I 0.445
AARA000827 Anopheles arabiensis AARA000827 I 0.663
AARA005389 Anopheles arabiensis AARA005389 I 0.445
AARA005391 Anopheles arabiensis AARA005391 I 0.741
AARA005393 Anopheles arabiensis AARA005393 I 0.583
AARA011914 Anopheles arabiensis AARA011914 I 0.575
AATE000638 Anopheles atroparvus AATE000638 I 0.445
AATE006542 Anopheles atroparvus AATE006542 N 0.556
AATE010587 Anopheles atroparvus AATE010587 I 0.445
AATE012157 Anopheles atroparvus AATE012157 N 0.610
ACAC_0000143401 Angiostrongylus cantonensis ACAC_0000143401 N 0.607
ACEP10855 Atta cephalotes ACEP10855 I 0.737
ACEP10859 Atta cephalotes ACEP10859 I 0.578
ACEP25270 Atta cephalotes ACEP25270 N 0.515
ACEP25857 Atta cephalotes ACEP25857 I 0.663
ACHR009359 Anopheles christyi ACHR009359 I 0.614
ACOM022795 Anopheles coluzzii ACOM022795 I 0.445
ACOM022800 Anopheles coluzzii ACOM022800 I 0.741
ACOM022803 Anopheles coluzzii ACOM022803 I 0.470
ACOM026664 Anopheles coluzzii ACOM026664 N 0.656
ACOM034662 Anopheles coluzzii ACOM034662 I 0.575
ACUA008554 Anopheles culicifacies ACUA008554 I 0.735
ACUA011783 Anopheles culicifacies ACUA011783 N 0.656
ACUA014541 Anopheles culicifacies ACUA014541 I 0.445
ACUA026266 Anopheles culicifacies ACUA026266 I 0.582
ACUA026638 Anopheles culicifacies ACUA026638 I 0.583
ACYPI008614 Acyrthosiphon pisum ACYPI008614 I 0.417
ADAC006830 Anopheles darlingi ADAC006830 I 0.445
ADIR005629 Anopheles dirus ADIR005629 I 0.445
ADIR005630 Anopheles dirus ADIR005630 I 0.735
ADIR005633 Anopheles dirus ADIR005633 I 0.583
ADIR009659 Anopheles dirus ADIR009659 I 0.663
AEPI003627 Anopheles epiroticus AEPI003627 I 0.445
AEPI003628 Anopheles epiroticus AEPI003628 I 0.741
AEPI007651 Anopheles epiroticus AEPI007651 N 0.513
AEPI007946 Anopheles epiroticus AEPI007946 N 0.607
AEPI010515 Anopheles epiroticus AEPI010515 I 0.583
AFAF017335 Anopheles farauti AFAF017335 I 0.563
AFAF019648 Anopheles farauti AFAF019648 I 0.445
AFAF020279 Anopheles farauti AFAF020279 I 0.445
AFUN009319 Anopheles funestus AFUN009319 I 0.663
AFUN010196 Anopheles funestus AFUN010196 I 0.583
AFUN010199 Anopheles funestus AFUN010199 I 0.695
AFUN010200 Anopheles funestus AFUN010200 I 0.445
AGAP010919 Anopheles gambiae AGAP010919 I 0.445
AGAP010922 Anopheles gambiae AGAP010922 I 0.445
AGAP010923 Anopheles gambiae AGAP010923 I 0.470
AGAP012033 Anopheles gambiae AGAP012033 I 0.663
AMAM006332 Anopheles maculatus AMAM006332 I 0.735
AMAM015893 Anopheles maculatus AMAM015893 I 0.514
AMAM018985 Anopheles maculatus AMAM018985 I 0.614
AMAM020704 Anopheles maculatus AMAM020704 I 0.445
AMAM022760 Anopheles maculatus AMAM022760 N 0.513
AMEC008804 Anopheles melas AMEC008804 I 0.583
AMEC012053 Anopheles melas AMEC012053 I 0.741
AMEC013513 Anopheles melas AMEC013513 I 0.445
AMEC014560 Anopheles melas AMEC014560 I 0.663
AMEC016085 Anopheles melas AMEC016085 I 0.582
AMEC019330 Anopheles melas AMEC019330 I 0.445
AMEM010579 Anopheles merus AMEM010579 I 0.470
AMEM010647 Anopheles merus AMEM010647 I 0.445
AMEM014190 Anopheles merus AMEM014190 I 0.741
AMIN001219 Anopheles minimus AMIN001219 I 0.575
AMIN008219 Anopheles minimus AMIN008219 I 0.616
AMIN009300 Anopheles minimus AMIN009300 I 0.445
AMIN009301 Anopheles minimus AMIN009301 I 0.741
AMIN009304 Anopheles minimus AMIN009304 I 0.583
ANCCAN_22368 Ancylostoma caninum ANCCAN_22368 N 0.563
ANCDUO_17471 Ancylostoma duodenale ANCDUO_17471 I 0.477
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N 0.662
AQUA001259 Anopheles quadriannulatus AQUA001259 I 0.470
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.735
AQUA001264 Anopheles quadriannulatus AQUA001264 I 0.445
AQUA004309 Anopheles quadriannulatus AQUA004309 I 0.582
ASIS016076 Anopheles sinensis ASIS016076 N 0.656
ASIS017439 Anopheles sinensis ASIS017439 I 0.445
ASTEI06129 Anopheles stephensi ASTEI06129 N 0.607
ASTEI06406 Anopheles stephensi ASTEI06406 I 0.445
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.741
ASTEI06410 Anopheles stephensi ASTEI06410 I 0.439
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N 0.454
A_06623 Schistosoma haematobium A_06623 I 0.430
BGIBMGA003079 Bombyx mori BGIBMGA003079 I 0.445
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.741
BGIBMGA004367 Bombyx mori BGIBMGA004367 I 0.616
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.663
BGLB010904 Biomphalaria glabrata BGLB010904 I 0.587
BOTBODRAFT_575815 Botryobasidium botryosum BOTBODRAFT_575815 N 0.448
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.656
Cflo_05873--XP_001121937.1_APIME Camponotus floridanus Cflo_05873--XP_001121937.1_APIME I 0.441
Cflo_12828--XP_001121910.1_APIME Camponotus floridanus Cflo_12828--XP_001121910.1_APIME I 0.435
CGOC_0001130501 Cylicostephanus goldi CGOC_0001130501 I 0.474
CLEC006959 Cimex lectularius CLEC006959 I 0.578
CLEC006961 Cimex lectularius CLEC006961 I 0.686
CLEC006963 Cimex lectularius CLEC006963 I 0.417
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.735
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.656
CPIJ014016 Culex quinquefasciatus CPIJ014016 N 0.556
CPIJ014424 Culex quinquefasciatus CPIJ014424 I 0.585
CPIJ017659 Culex quinquefasciatus CPIJ017659 I 0.555
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.735
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.656
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N 0.556
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I 0.585
CpipJ_CPIJ017659 Culex pipiens CpipJ_CPIJ017659 I 0.555
D Drosophila melanogaster FBgn0000411 D 0.445
D918_08316 Trichuris suis D918_08316 N 0.620
DAPPUDRAFT_18307 Daphnia pulex DAPPUDRAFT_18307 I 0.445
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.469
DAPPUDRAFT_37091 Daphnia pulex DAPPUDRAFT_37091 I 0.445
ENSAMEG00000016773 Ailuropoda melanoleuca ENSAMEG00000016773 I 0.465
ENSAMXG00000007582 Astyanax mexicanus ENSAMXG00000007582 I 0.524
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.554
ENSCSAVG00000000494 Ciona savignyi ENSCSAVG00000000494 I 0.470
ENSCSAVG00000009278 Ciona savignyi ENSCSAVG00000009278 I 0.416
ENSDNOG00000034433 Dasypus novemcinctus ENSDNOG00000034433 N 0.472
ENSDORG00000001450 Dipodomys ordii ENSDORG00000001450 I 0.415
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I 0.590
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I 0.590
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I 0.580
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.644
ENSMEUG00000014457 Macropus eugenii ENSMEUG00000014457 I 0.415
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I 0.571
ENSNLEG00000009528 Nomascus leucogenys ENSNLEG00000009528 I 0.521
ENSNLEG00000010228 Nomascus leucogenys ENSNLEG00000010228 I 0.418
ENSOARG00000009998 Ovis aries ENSOARG00000009998 I 0.578
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I 0.587
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I 0.614
ENSPTRG00000005969 Pan troglodytes ENSPTRG00000005969 I 0.591
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.650
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.644
ENSTTRG00000005878 Tursiops truncatus ENSTTRG00000005878 I 0.616
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I 0.590
estExt_fgenesh1_pg.C_90036 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_90036 N 0.437
estExt_fgenesh2_kg.C_6920001 Branchiostoma floridae estExt_fgenesh2_kg.C_6920001 I 0.416
estExt_fgenesh2_pg.C_4740022 Branchiostoma floridae estExt_fgenesh2_pg.C_4740022 I 0.416
estExt_fgenesh2_pg.C_6920002 Branchiostoma floridae estExt_fgenesh2_pg.C_6920002 I 0.416
fgenesh2_pg.scaffold_474000021 Branchiostoma floridae fgenesh2_pg.scaffold_474000021 I 0.416
GA19209 Drosophila pseudoobscura FBgn0079206 I 0.445
GA23525 Drosophila pseudoobscura FBgn0244926 I 0.445
GB40960 Apis mellifera GB40960 I 0.663
GB45075 Apis mellifera GB45075 I 0.441
GD12627 Drosophila simulans FBgn0184354 I 0.445
GD12629 Drosophila simulans FBgn0184356 I 0.445
GE20027 Drosophila yakuba FBgn0237352 I 0.445
GE20028 Drosophila yakuba FBgn0237353 I 0.445
genemark-nMf.1.1.scaf16788-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf16788-processed-gene-0.1 I 0.518
GF25204 Drosophila ananassae FBgn0102196 I 0.445
GF25205 Drosophila ananassae FBgn0102197 I 0.445
Gfo_R009506 Geospiza fortis Gfo_R009506 I 0.542
GG13733 Drosophila erecta FBgn0105996 I 0.445
GG13734 Drosophila erecta FBgn0105997 I 0.445
GH16344 Drosophila grimshawi FBgn0123815 I 0.445
GI11536 Drosophila mojavensis FBgn0134296 I 0.445
GI11537 Drosophila mojavensis FBgn0134297 I 0.445
GJ11555 Drosophila virilis FBgn0198813 I 0.445
GJ11556 Drosophila virilis FBgn0198814 I 0.445
GK17143 Drosophila willistoni FBgn0219142 I 0.445
GK17144 Drosophila willistoni FBgn0219143 I 0.445
GL24831 Drosophila persimilis FBgn0162419 I 0.445
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.499
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.453
GM24555 Drosophila sechellia FBgn0179418 I 0.445
GM24556 Drosophila sechellia FBgn0179419 I 0.445
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.426
GRMZM2G150348 Zea mays GRMZM2G150348 N 0.417
Hba_12930 Heterorhabditis bacteriophora Hba_12930 I 0.452
HBP1 Homo sapiens ENSG00000105856 D 0.437
HelroG148277 Helobdella robusta HelroG148277 N 0.466
HHAL004464-PA Halyomorpha halys HHAL004464-PA I 0.417
HMEL002856 Heliconius melpomene HMEL002856 I 0.445
HMEL003506 Heliconius melpomene HMEL003506 I 0.445
HMEL016850 Heliconius melpomene HMEL016850 I 0.663
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.656
Hsal_04292--XP_001121937.1_APIME Harpegnathos saltator Hsal_04292--XP_001121937.1_APIME I 0.441
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.580
ISCW009925 Ixodes scapularis ISCW009925 I 0.587
KGM_03273 Danaus plexippus KGM_03273 I 0.445
KGM_05609 Danaus plexippus KGM_05609 N 0.656
L798_02392 Zootermopsis nevadensis L798_02392 I 0.600
L798_04020 Zootermopsis nevadensis L798_04020 N 0.533
L798_09360 Zootermopsis nevadensis L798_09360 N 0.532
L798_12045 Zootermopsis nevadensis L798_12045 I 0.551
L798_12048 Zootermopsis nevadensis L798_12048 I 0.417
L898_g3197 Steinernema monticolum L898_g3197 I 0.540
LCUP001583 Lucilia cuprina LCUP001583 I 0.445
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.656
LDEC019308 Leptinotarsa decemlineata LDEC019308 I 0.417
LLOJ000741 Lutzomyia longipalpis LLOJ000741 I 0.417
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.741
LotgiG88815 Lottia gigantea LotgiG88815 I 0.587
MCINX002905 Melitaea cinxia MCINX002905 I 0.735
MCINX008902 Melitaea cinxia MCINX008902 I 0.439
MDOA001988 Musca domestica MDOA001988 I 0.445
MDOA009764 Musca domestica MDOA009764 I 0.445
MESCA000459 Megaselia scalaris MESCA000459 I 0.735
MESCA009852 Megaselia scalaris MESCA009852 I 0.583
ML23337a Mnemiopsis leidyi ML23337a N 0.517
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.418
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.669
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.669
nDi.2.2.2.g10379 Dirofilaria immitis nDi.2.2.2.g10379 I 0.557
NECAME_14932 Necator americanus NECAME_14932 N 0.423
nLs.2.1.2.g10155 Litomosoides sigmodontis nLs.2.1.2.g10155 I 0.551
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.656
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.417
Ogr06603 Ophisaurus gracilis Ogr06603 I 0.434
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.436
PEQ_0000771101 Parascaris equorum PEQ_0000771101 I 0.486
PHUM136100 Pediculus humanus PHUM136100 I 0.441
PHUM136210 Pediculus humanus PHUM136210 I 0.417
PHUM433270 Pediculus humanus PHUM433270 N 0.656
PK25712.1 Cannabis sativa PK25712.1 N 0.415
PPAI006496 Phlebotomus papatasi PPAI006496 I 0.417
PPAI008595 Phlebotomus papatasi PPAI008595 N 0.587
PPAI009257 Phlebotomus papatasi PPAI009257 N 0.547
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.454
RPRC012125 Rhodnius prolixus RPRC012125 N 0.656
RPRC012780 Rhodnius prolixus RPRC012780 I 0.580
RPRC014334 Rhodnius prolixus RPRC014334 I 0.578
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.479
SBAD_0000359201 Soboliphyme baturini SBAD_0000359201 I 0.435
SCUD_0001837801 Schistosoma curassoni SCUD_0001837801 I 0.430
SEPMUDRAFT_152382 Sphaerulina musiva SEPMUDRAFT_152382 N 0.524
SINV16626 Solenopsis invicta SINV16626 I 0.663
SINV19744 Solenopsis invicta SINV19744 I 0.578
SINV19753 Solenopsis invicta SINV19753 I 0.690
Sjc_0095610 Schistosoma japonicum Sjc_0095610 N 0.424
Sjc_0131400 Schistosoma japonicum Sjc_0131400 I 0.430
SMAR002458 Strigamia maritima SMAR002458 I 0.435
SMAR010127 Strigamia maritima SMAR010127 N 0.656
Smp_180820 Schistosoma mansoni Smp_180820 I 0.430
SMRZ_0001533401 Schistosoma margrebowiei SMRZ_0001533401 I 0.430
SMTD_0000730401 Schistosoma mattheei SMTD_0000730401 I 0.430
SOX1 Anolis carolinensis ENSACAG00000006346 I 0.597
SOX10 Meleagris gallopavo ENSMGAG00000012508 I 0.542
SOX10 Erinaceus europaeus ENSEEUG00000011263 I 0.590
SOX10 Procavia capensis ENSPCAG00000005913 I 0.590
SOX10 Ochotona princeps ENSOPRG00000013575 I 0.590
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.454
SOX12 Sus scrofa ENSSSCG00000021920 I 0.634
SOX13 Microcebus murinus ENSMICG00000009236 I 0.644
SOX13 Felis catus ENSFCAG00000002900 I 0.650
SOX17 Procavia capensis ENSPCAG00000003188 I 0.656
Sox21b Drosophila melanogaster FBgn0042630 D 0.445
SOX3 Pteropus vampyrus ENSPVAG00000003166 I 0.578
SOX30 Procavia capensis ENSPCAG00000010619 N 0.439
SOX5 Sorex araneus ENSSARG00000007963 I 0.644
SOX6 Echinops telfairi ENSETEG00000001898 I 0.644
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.644
SOX6 Procavia capensis ENSPCAG00000001398 N 0.644
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.644
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.644
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.629
SOX9 Pteropus vampyrus ENSPVAG00000010505 I 0.590
sox9b Danio rerio ENSDARG00000043923 I 0.580
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.459
SPER_0003908701 Spirometra erinaceieuropaei SPER_0003908701 I 0.434
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N 0.423
TC003791 Tribolium castaneum TC003791 I 0.580
TC009854 Tribolium castaneum TC009854 I 0.556
TC013165 Tribolium castaneum TC013165 I 0.441
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.644
THITE_2010224 Thielavia terrestris THITE_2010224 N 0.426
TRE_0002161801 Trichobilharzia regenti TRE_0002161801 I 0.430
WUBG_09252 Wuchereria bancrofti WUBG_09252 I 0.551
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.426
XP_002935939 Xenopus tropicalis XP_002935939 I 0.580
YQE_08560 Dendroctonus ponderosae YQE_08560 I 0.513
YQE_13042 Dendroctonus ponderosae YQE_13042 I 0.663