CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC009474
(
Leptinotarsa decemlineata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LDEC009474
T334893_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC009474-PA
Sox
156
198
QNLTSYKLFQQHVRPLLAKENPKVPMTKLMMLVAAKWREFSNI
Links
Other
Sox
family TFs
Other
Leptinotarsa decemlineata
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SINV11745
Solenopsis invicta
SINV11745
N
0.725
ACEP22065
Atta cephalotes
ACEP22065
N
0.725
YQE_12532
Dendroctonus ponderosae
YQE_12532
N
0.706
MCINX004608
Melitaea cinxia
MCINX004608
N
0.586
BGIBMGA002931
Bombyx mori
BGIBMGA002931
N
0.580
KGM_21779
Danaus plexippus
KGM_21779
N
0.575
GG13363
Drosophila erecta
FBgn0105635
N
0.571
GK17504
Drosophila willistoni
FBgn0219503
N
0.570
ENSMPUG00000008872
Mustela putorius furo
ENSMPUG00000008872
N
0.548
ISCW005933
Ixodes scapularis
ISCW005933
N
0.546
ACYPI56610
Acyrthosiphon pisum
ACYPI56610
N
0.524
ENSOCUG00000023865
Oryctolagus cuniculus
ENSOCUG00000023865
N
0.520
CHD5
Macaca mulatta
ENSMMUG00000016838
N
0.520
chd3
Xenopus tropicalis
XB-GENE-1008908
N
0.514
ENSTNIG00000004346
Tetraodon nigroviridis
ENSTNIG00000004346
N
0.507
chd3
Oryzias latipes
ENSORLG00000007107
N
0.507
CHD5
Sus scrofa
ENSSSCG00000003366
N
0.487
CHD3
Pteropus vampyrus
ENSPVAG00000016344
N
0.487
ENSMEUG00000005852
Macropus eugenii
ENSMEUG00000005852
N
0.487
CHD5
Gallus gallus
ENSGALG00000000747
N
0.487
CHD5
Echinops telfairi
ENSETEG00000004120
N
0.480
XP_002941963
Xenopus tropicalis
XP_002941963
N
0.472
ENSSHAG00000004107
Sarcophilus harrisii
ENSSHAG00000004107
N
0.472
CHD4
Ochotona princeps
ENSOPRG00000003477
N
0.472
CHD4
Microcebus murinus
ENSMICG00000006588
N
0.472
CHD4
Echinops telfairi
ENSETEG00000005912
N
0.472
ENSMODG00000024829
Monodelphis domestica
ENSMODG00000024829
N
0.472
MGG_00866
Magnaporthe oryzae
MGG_00866
N
0.462
fgeneshHS_pg.scaffold_50000080
Naegleria gruberi
fgeneshHS_pg.scaffold_50000080
N
0.451
THITE_22048
Thielavia terrestris
THITE_22048
I
0.447
MYCTH_2308522
Myceliophthora thermophila
MYCTH_2308522
I
0.437
S40288_05696
Stachybotrys chartarum
S40288_05696
N
0.436
S40285_07156
Stachybotrys chlorohalonata
S40285_07156
N
0.436
TRIVIDRAFT_16124
Trichoderma virens
TRIVIDRAFT_16124
N
0.434
TRIATDRAFT_37227
Trichoderma atroviride
TRIATDRAFT_37227
N
0.432
chd4b
Danio rerio
ENSDARG00000025789
N
0.428
BBA_10208
Beauveria bassiana
BBA_10208
N
0.426
BOTBODRAFT_40635
Botryobasidium botryosum
BOTBODRAFT_40635
N
0.421
ENSAMEG00000017006
Ailuropoda melanoleuca
ENSAMEG00000017006
N
0.419