PredSwiss_ASS2010_4422.1 (Pneumocystis carinii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PredSwiss_ASS2010_4422.1 T334945_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_ASS2010_4422.1 Sox 1 55

Links

Other Sox family TFs
Other Pneumocystis carinii TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
sox-2 Caenorhabditis elegans WBGene00004949 I 0.418
MESCA012239 Megaselia scalaris MESCA012239 I 0.418
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.418
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.416
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.418
PredSwiss_EST620.1 Pneumocystis carinii PredSwiss_EST620.1 N 0.398
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.450
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.443
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.418
AWRI1499_3370 Brettanomyces bruxellensis AWRI1499_3370 N 0.428
PNEG_02277 Pneumocystis murina PNEG_02277 N 0.398
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.437
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.450
CNM02020 Cryptococcus neoformans CNM02020 N 0.430
CC1G_07924 Coprinopsis cinerea CC1G_07924 N 0.434
CaO19.9299 Candida albicans CaO19.9299 N 0.428
CaO19.1731 Candida albicans CaO19.1731 N 0.428
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N 0.439
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.443