Sjc_0021990 (Schistosoma japonicum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Sjc_0021990 T334973_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.424 0.353
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000002062 Sox 11 78

Links

Other Sox family TFs
Other Schistosoma japonicum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMRZ_0000758001 Schistosoma margrebowiei SMRZ_0000758001 I 0.735
A_02303 Schistosoma haematobium A_02303 I 0.735
SMTD_0001766201 Schistosoma mattheei SMTD_0001766201 I 0.735
Smp_173650 Schistosoma mansoni Smp_173650 I 0.735
SROB_0001231001 Schistosoma rodhaini SROB_0001231001 I 0.735
SCUD_0001691501 Schistosoma curassoni SCUD_0001691501 I 0.708
TRE_0001526701 Trichobilharzia regenti TRE_0001526701 N 0.580
DILT_0001682001 Diphyllobothrium latum DILT_0001682001 N 0.446
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.443
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.437
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.437
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.437
ECPE_0001729301 Echinostoma caproni ECPE_0001729301 N 0.437
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.431
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.424
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.424
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.424
NCU02819 Neurospora crassa NCU02819 D 0.424
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.419