SMU15027649 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15027649 T335022_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15027649 Sox 13 85
SMU15027649 Sox 113 179

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMU15029911 Schmidtea mediterranea SMU15029911 N 0.545
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.519
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.519
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.519
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.519
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.519
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.519
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.519
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.519
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.513
hmgb2a Danio rerio ENSDARG00000029722 N 0.513
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.513
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.505
hmgb3b Danio rerio ENSDARG00000006408 N 0.505
HelroG157726 Helobdella robusta HelroG157726 N 0.503
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.499
AAH44009 Xenopus laevis AAH44009 N 0.496
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.496
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.494
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.493
SMU15030340 Schmidtea mediterranea SMU15030340 N 0.488
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.487
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.487
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.487
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.486
SMU15013231 Schmidtea mediterranea SMU15013231 N 0.484
ENSMPUG00000020113 Mustela putorius furo ENSMPUG00000020113 N 0.482
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.481
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.481
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.481
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.481
A_00070 Schistosoma haematobium A_00070 N 0.481
ENSPANG00000023341 Papio anubis ENSPANG00000023341 N 0.480
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.480
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.479
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.479
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.479
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.479
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.479
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.479
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.477
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.477
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.477
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.477
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.477
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.477
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.477
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.477
SINV22586 Solenopsis invicta SINV22586 N 0.477
hmgb1a Danio rerio ENSDARG00000099175 N 0.477
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.477
ACEP16613 Atta cephalotes ACEP16613 N 0.477
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.477
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.477
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.476
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N 0.476
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.476
SMAR013695 Strigamia maritima SMAR013695 N 0.475
D915_00818 Fasciola hepatica D915_00818 N 0.475
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.475
T265_12733 Opisthorchis viverrini T265_12733 N 0.474
ENSOGAG00000029272 Otolemur garnettii ENSOGAG00000029272 N 0.474
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N 0.474
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.473
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.473
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.473
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.473
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.471
Smp_100090 Schistosoma mansoni Smp_100090 N 0.471
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.471
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.471
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.471
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.471
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.471
ENSCSAG00000010707 Chlorocebus sabaeus ENSCSAG00000010707 N 0.470
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.469
T265_10726 Opisthorchis viverrini T265_10726 N 0.469
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.468
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.467
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.466
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.466
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.466
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N 0.465
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.465
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.465
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.464
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.464
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.464
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N 0.464
NECAME_09126 Necator americanus NECAME_09126 N 0.464
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N 0.464
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.462
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.462
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.462
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.462
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.461
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.461
ENSPANG00000020000 Papio anubis ENSPANG00000020000 N 0.461
GH12282 Drosophila grimshawi FBgn0119761 N 0.460
Dsp1 Drosophila melanogaster FBgn0011764 N 0.460
GI10980 Drosophila mojavensis FBgn0133743 N 0.460
GD17278 Drosophila simulans FBgn0188840 N 0.460
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.460
GG17955 Drosophila erecta FBgn0110175 N 0.460
LCUP007363 Lucilia cuprina LCUP007363 N 0.460
AMEM017336 Anopheles merus AMEM017336 N 0.460
AMEC021909 Anopheles melas AMEC021909 N 0.460
AMAM015540 Anopheles maculatus AMAM015540 N 0.460
AFUN010134 Anopheles funestus AFUN010134 N 0.460
AMIN005344 Anopheles minimus AMIN005344 N 0.460
ASIS000124 Anopheles sinensis ASIS000124 N 0.460
TsM_000115400 Taenia solium TsM_000115400 N 0.460
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.460
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.460
AFAF003948 Anopheles farauti AFAF003948 N 0.460
AEPI002924 Anopheles epiroticus AEPI002924 N 0.460
NV15664 Nasonia vitripennis NV15664 N 0.460
GE17263 Drosophila yakuba FBgn0234741 N 0.460
GK25058 Drosophila willistoni FBgn0227017 N 0.460
AALB006743 Anopheles albimanus AALB006743 N 0.460
AARA010318 Anopheles arabiensis AARA010318 N 0.460
ADIR011701 Anopheles dirus ADIR011701 N 0.460
ACUA021022 Anopheles culicifacies ACUA021022 N 0.460
AATE018776 Anopheles atroparvus AATE018776 N 0.460
GJ19445 Drosophila virilis FBgn0206588 N 0.460
GF19115 Drosophila ananassae FBgn0096126 N 0.460
AGAP000005 Anopheles gambiae AGAP000005 N 0.460
ADAC001494 Anopheles darlingi ADAC001494 N 0.460
AAEL011380 Aedes aegypti AAEL011380 N 0.460
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.459
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.458
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.458
AAH73449 Xenopus laevis AAH73449 N 0.457
AAC59859 Xenopus laevis AAC59859 N 0.457
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.457
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.457
BAA06440 Xenopus laevis BAA06440 N 0.456
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.456
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.456
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.456
ENSCJAG00000011146 Callithrix jacchus ENSCJAG00000011146 N 0.456
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.456
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.456
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.456
ENSGGOG00000026945 Gorilla gorilla ENSGGOG00000026945 N 0.456
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.456
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.456
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.456
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.456
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.456
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.456
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.456
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.456
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.456
HMEL007340 Heliconius melpomene HMEL007340 N 0.453
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.453
ENSPANG00000025478 Papio anubis ENSPANG00000025478 N 0.453
ENSCJAG00000003900 Callithrix jacchus ENSCJAG00000003900 N 0.452
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.451
CapteG158220 Capitella teleta CapteG158220 N 0.449
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.449
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.448
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N 0.448
Smp_000980 Schistosoma mansoni Smp_000980 N 0.448
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.448
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.448
AAI68534 Xenopus tropicalis AAI68534 N 0.447
LotgiG200052 Lottia gigantea LotgiG200052 N 0.446
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.446
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.446
ASU_03902 Ascaris suum ASU_03902 N 0.445
L892_g17551 Steinernema scapterisci L892_g17551 N 0.445
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.445
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.445
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.445
Bm4180 Brugia malayi Bm4180 N 0.445
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.445
L893_g5947 Steinernema glaseri L893_g5947 N 0.445
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.445
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.445
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.445
L889_g13533 Steinernema feltiae L889_g13533 N 0.445
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.445
MDOA008812 Musca domestica MDOA008812 N 0.445
ISCW017350 Ixodes scapularis ISCW017350 N 0.445
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.445
PHUM006290 Pediculus humanus PHUM006290 N 0.445
LOAG_04936 Loa loa LOAG_04936 N 0.445
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N 0.444
HMGB1 Bos taurus ENSBTAG00000014862 N 0.443
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.442
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.442
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.442
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.442
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.442
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.442
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.441
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N 0.441
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.440
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.440
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.440
D918_07195 Trichuris suis D918_07195 N 0.439
ENSCJAG00000007594 Callithrix jacchus ENSCJAG00000007594 N 0.439
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.439
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.438
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.438
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N 0.437
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.436
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.436
ENSGGOG00000023427 Gorilla gorilla ENSGGOG00000023427 N 0.436
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.436
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.436
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.436
ENSOGAG00000006589 Otolemur garnettii ENSOGAG00000006589 N 0.436
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.434
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.434
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.433
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N 0.433
CBN17977 Caenorhabditis brenneri CBN17977 N 0.432
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.432
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.432
csin112095 Clonorchis sinensis csin112095 N 0.432
CBG17468 Caenorhabditis briggsae CBG17468 N 0.432
CJA09678 Caenorhabditis japonica CJA09678 N 0.432
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N 0.431
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.431
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.430
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.430
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.429
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.429
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.429
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.429
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.429
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N 0.429
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N 0.429
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.428
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.427
HelroG157878 Helobdella robusta HelroG157878 N 0.427
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.426
TsM_000746700 Taenia solium TsM_000746700 N 0.426
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.426
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.426
ENSBTAP00000052990-D1 Bos grunniens ENSBTAP00000052990-D1 N 0.426
ENSBTAG00000015315 Bos taurus ENSBTAG00000015315 N 0.426
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.425
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.425
RGD1563668 Rattus norvegicus ENSRNOG00000038478 N 0.424
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.424
ENSCSAG00000017502 Chlorocebus sabaeus ENSCSAG00000017502 N 0.424
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N 0.424
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N 0.424
ENSMMUG00000010106 Macaca mulatta ENSMMUG00000010106 I 0.423
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.423
ASIS009950 Anopheles sinensis ASIS009950 N 0.420
PITG_16117 Phytophthora infestans PITG_16117 N 0.420
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N 0.420
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.419
ENSOGAG00000033658 Otolemur garnettii ENSOGAG00000033658 N 0.419
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.419
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.418
F443_05401 Phytophthora parasitica F443_05401 N 0.418
ENSGGOG00000025769 Gorilla gorilla ENSGGOG00000025769 N 0.418
estExt_fgenesh1_kg.C_12090001 Phytophthora capsici estExt_fgenesh1_kg.C_12090001 N 0.418
ENSOARG00000002938 Ovis aries ENSOARG00000002938 N 0.417
D917_08189 Trichinella nativa D917_08189 N 0.417
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N 0.417
ENSCSAG00000001500 Chlorocebus sabaeus ENSCSAG00000001500 N 0.416
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N 0.416