SMU15029911 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15029911 T335026_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15029911 Sox 4 76
SMU15029911 Sox 101 167

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.545
SMU15013231 Schmidtea mediterranea SMU15013231 N 0.488
SMU15024564 Schmidtea mediterranea SMU15024564 N 0.472
HelroG157726 Helobdella robusta HelroG157726 N 0.467
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.448
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N 0.441
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.427
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.427
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.427
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.427
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.427
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.427
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.427
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.427
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.427
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.427
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.427
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.427
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.427
D915_00818 Fasciola hepatica D915_00818 N 0.425
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.424
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.424
T265_12733 Opisthorchis viverrini T265_12733 N 0.423
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.421
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.421
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.421
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.421
Smp_000980 Schistosoma mansoni Smp_000980 N 0.421
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.420
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.420
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.420
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.420
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.420
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.420
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.420
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.420
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.420
hmgb2a Danio rerio ENSDARG00000029722 N 0.419
SMU15030340 Schmidtea mediterranea SMU15030340 N 0.419
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.418
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.418
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.418
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.417
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N 0.416
TsM_000115400 Taenia solium TsM_000115400 N 0.415
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.415