SMU15039664 (Schmidtea mediterranea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMU15039664 T335039_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox15
M03973_2.00 		Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW		 SELEX
Nitta et al.(2015)
Sox15_1 		0.441 0.478
Sox15
M03974_2.00 		Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox15_2 		0.441 0.478
Sox15
M06450_2.00 		Drosophila melanogaster
RWACAATR
YATTGTWY		 B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613 		0.441 0.478
egl-13
M00710_2.00 		Caenorhabditis elegans
NNAACAATWN
NWATTGTTNN		 PBM
Narasimhan et al.(2015)
pTH9125 		0.436 0.449
Sox30
M00201_2.00 		Mus musculus
ATTRTBNNNN
NNNNVAYAAT		 PBM
Badis et al.(2009)
Sox30_2781 		0.425 0.406
SOX30
M05753_2.00 		Homo sapiens
NRACAATN
NATTGTYN		 SELEX
Yin et al.(2017)
SOX30_eDBD_HT-SELEX 		0.425 0.406
SOX30
M05754_2.00 		Homo sapiens
BATTGTYN
NRACAATV		 SELEX
Yin et al.(2017)
SOX30_eDBD_Methyl-HT-SELEX 		0.425 0.406
Sox15
M00202_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox15_3457 		0.419 0.493
SOX15
M03508_2.00 		Homo sapiens
AACAATAMCATTGTT
AACAATGKTATTGTT		 SELEX
Jolma et al.(2013)
SOX15_1 		0.419 0.478
SOX15
M03509_2.00 		Homo sapiens
ATCAATAMCATTGAT
ATCAATGKTATTGAT		 SELEX
Jolma et al.(2013)
SOX15_2 		0.419 0.478
SOX15
M03510_2.00 		Homo sapiens
ATGAATAACATTCAT
ATGAATGTTATTCAT		 SELEX
Jolma et al.(2013)
SOX15_3 		0.419 0.478
SOX15
M05893_2.00 		Homo sapiens
YYWTTGTNHN
NDNACAAWRR		 SMiLE-seq
Isakova et al.(2017)
SOX15 		0.419 0.478
SOX15
M11308_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX15_Q3 		0.419 0.478
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15039664 Sox 81 149

Links

Other Sox family TFs
Other Schmidtea mediterranea TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XP_002160791.1 Hydra magnipapillata XP_002160791.1 I 0.533
HelroG125118 Helobdella robusta HelroG125118 I 0.503
nRc.2.0.1.g22623 Romanomermis culicivorax nRc.2.0.1.g22623 I 0.479
fgenesh2_pg.scaffold_474000021 Branchiostoma floridae fgenesh2_pg.scaffold_474000021 I 0.466
estExt_fgenesh2_kg.C_6920001 Branchiostoma floridae estExt_fgenesh2_kg.C_6920001 I 0.466
ENSPFOG00000017781 Poecilia formosa ENSPFOG00000017781 I 0.459
ENSXMAG00000017288 Xiphophorus maculatus ENSXMAG00000017288 I 0.459
HDID_0000757301 Hymenolepis diminuta HDID_0000757301 I 0.459
HNAJ_0000734901 Hymenolepis nana HNAJ_0000734901 I 0.459
HmN_000097600 Hymenolepis microstoma HmN_000097600 I 0.459
ENSLACG00000015447 Latimeria chalumnae ENSLACG00000015447 I 0.453
ISCW015396 Ixodes scapularis ISCW015396 I 0.449
estExt_fgenesh2_pg.C_1230066 Branchiostoma floridae estExt_fgenesh2_pg.C_1230066 I 0.449
ML234028a Mnemiopsis leidyi ML234028a I 0.447
DAPPUDRAFT_199562 Daphnia pulex DAPPUDRAFT_199562 I 0.444
DAPPUDRAFT_39527 Daphnia pulex DAPPUDRAFT_39527 I 0.444
NEMVEDRAFT_v1g110350 Nematostella vectensis NEMVEDRAFT_v1g110350 I 0.443
NEMVEDRAFT_v1g131609 Nematostella vectensis NEMVEDRAFT_v1g131609 I 0.442
tetur03g02300 Tetranychus urticae tetur03g02300 I 0.442
MCINX000748 Melitaea cinxia MCINX000748 I 0.442
HMEL008012 Heliconius melpomene HMEL008012 I 0.442
L798_12872 Zootermopsis nevadensis L798_12872 I 0.442
GE12330 Drosophila yakuba FBgn0230081 I 0.441
GA21052 Drosophila pseudoobscura FBgn0081040 I 0.441
MDOA011444 Musca domestica MDOA011444 I 0.441
Sox15 Drosophila melanogaster FBgn0005613 D 0.441
GF12898 Drosophila ananassae FBgn0089932 I 0.441
GM20225 Drosophila sechellia FBgn0175108 I 0.441
GJ22304 Drosophila virilis FBgn0209417 I 0.441
GL17288 Drosophila persimilis FBgn0154891 I 0.441
GH20045 Drosophila grimshawi FBgn0127509 I 0.441
GI20453 Drosophila mojavensis FBgn0143189 I 0.441
GG22439 Drosophila erecta FBgn0114611 I 0.441
GK21748 Drosophila willistoni FBgn0223733 I 0.441
HelroG153157 Helobdella robusta HelroG153157 I 0.440
HHAL004749-PA Halyomorpha halys HHAL004749-PA I 0.440
CLEC005968 Cimex lectularius CLEC005968 I 0.440
CpipJ_CPIJ014423 Culex pipiens CpipJ_CPIJ014423 I 0.438
YQE_05368 Dendroctonus ponderosae YQE_05368 I 0.438
AFUN010813 Anopheles funestus AFUN010813 I 0.438
AFAF000302 Anopheles farauti AFAF000302 I 0.438
AMAM020664 Anopheles maculatus AMAM020664 I 0.438
AMEM016314 Anopheles merus AMEM016314 I 0.438
ASIS021991 Anopheles sinensis ASIS021991 I 0.438
AQUA008384 Anopheles quadriannulatus AQUA008384 I 0.438
AEPI008777 Anopheles epiroticus AEPI008777 I 0.438
ACUA012505 Anopheles culicifacies ACUA012505 I 0.438
TC008936 Tribolium castaneum TC008936 I 0.438
PHUM199330 Pediculus humanus PHUM199330 I 0.438
Hsal_07336--XP_001122631.1_APIME Harpegnathos saltator Hsal_07336--XP_001122631.1_APIME I 0.438
LDEC012846 Leptinotarsa decemlineata LDEC012846 I 0.438
ACOM035268 Anopheles coluzzii ACOM035268 I 0.438
AALB003205 Anopheles albimanus AALB003205 I 0.438
NV11551 Nasonia vitripennis NV11551 I 0.438
GB45639 Apis mellifera GB45639 I 0.438
AAEL011831 Aedes aegypti AAEL011831 I 0.438
CPIJ014423 Culex quinquefasciatus CPIJ014423 I 0.438
MhA1_Contig1858.frz3.gene1 Meloidogyne hapla MhA1_Contig1858.frz3.gene1 I 0.437
tetur24g01340 Tetranychus urticae tetur24g01340 I 0.437
CapteG128551 Capitella teleta CapteG128551 I 0.437
genemark-nMf.1.1.scaf01883-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf01883-processed-gene-0.2 I 0.437
GPLIN_001384100 Globodera pallida GPLIN_001384100 I 0.437
Minc08584 Meloidogyne incognita Minc08584 I 0.437
XP_002169347.1 Hydra magnipapillata XP_002169347.1 I 0.436
CJA05617 Caenorhabditis japonica CJA05617 I 0.436
CBN13341 Caenorhabditis brenneri CBN13341 I 0.436
CBG14721 Caenorhabditis briggsae CBG14721 I 0.436
TC014650 Tribolium castaneum TC014650 I 0.436
egl-13 Caenorhabditis elegans WBGene00001182 D 0.436
KGM_02104 Danaus plexippus KGM_02104 I 0.436
CRE00702 Caenorhabditis remanei CRE00702 I 0.436
CBN25722 Caenorhabditis brenneri CBN25722 I 0.436
XP_002163785.1 Hydra magnipapillata XP_002163785.1 I 0.436
BGIBMGA004151 Bombyx mori BGIBMGA004151 I 0.436
GB45074 Apis mellifera GB45074 I 0.435
ADIR001558 Anopheles dirus ADIR001558 I 0.432
sox15 Xenopus tropicalis XB-GENE-6455809 I 0.432
AATE007979 Anopheles atroparvus AATE007979 I 0.432
AARA002996 Anopheles arabiensis AARA002996 I 0.432
SMUV_0000981301 Syphacia muris SMUV_0000981301 I 0.432
SMUV_0000691501 Syphacia muris SMUV_0000691501 I 0.432
AMIN007346 Anopheles minimus AMIN007346 I 0.432
TC013163 Tribolium castaneum TC013163 I 0.432
AMEC017169 Anopheles melas AMEC017169 I 0.432
ASTEI09242 Anopheles stephensi ASTEI09242 I 0.432
AGAP005183 Anopheles gambiae AGAP005183 I 0.432
ACYPI51262 Acyrthosiphon pisum ACYPI51262 I 0.430
RPRC001209 Rhodnius prolixus RPRC001209 I 0.430
RPRC000630 Rhodnius prolixus RPRC000630 I 0.430
HelroG78231 Helobdella robusta HelroG78231 I 0.427
csin106380 Clonorchis sinensis csin106380 I 0.427
T265_11165 Opisthorchis viverrini T265_11165 I 0.427
T265_11164 Opisthorchis viverrini T265_11164 I 0.427
fgenesh2_pg.scaffold_82000004 Branchiostoma floridae fgenesh2_pg.scaffold_82000004 I 0.426
e_gw.60.234.1 Branchiostoma floridae e_gw.60.234.1 I 0.426
SOX30 Felis catus ENSFCAG00000003853 I 0.425
SOX30 Homo sapiens ENSG00000039600 D 0.425
SOX30 Bos taurus ENSBTAG00000020491 I 0.425
SOX30 Equus caballus ENSECAG00000016620 I 0.425
ENSMMUP00000028380 Macaca fascicularis ENSMMUP00000028380 I 0.425
SOX30 Echinops telfairi ENSETEG00000000461 I 0.425
ENSDORG00000001450 Dipodomys ordii ENSDORG00000001450 I 0.425
SOX30 Cavia porcellus ENSCPOG00000000397 I 0.425
SOX30 Callithrix jacchus ENSCJAG00000018960 I 0.425
Myotis_brandtii_SOX30_10034825 Myotis brandtii Myotis_brandtii_SOX30_10034825 I 0.425
ENSAMEG00000006342 Ailuropoda melanoleuca ENSAMEG00000006342 I 0.425
ENSCSAG00000010596 Chlorocebus sabaeus ENSCSAG00000010596 I 0.425
SOX30 Dasypus novemcinctus ENSDNOG00000002213 I 0.425
SOX30 Canis familiaris ENSCAFG00000017351 I 0.425
ENSBTAP00000027304-D1 Bos grunniens ENSBTAP00000027304-D1 I 0.425
SOX30 Gorilla gorilla ENSGGOG00000025241 I 0.425
ENSOARG00000012571 Ovis aries ENSOARG00000012571 I 0.425
ENSSHAG00000016758 Sarcophilus harrisii ENSSHAG00000016758 I 0.425
SOX30 Sus scrofa ENSSSCG00000017051 I 0.425
ENSSTOG00000014216 Ictidomys tridecemlineatus ENSSTOG00000014216 I 0.425
ENSOANG00000021410 Ornithorhynchus anatinus ENSOANG00000021410 I 0.425
SOX30 Oryctolagus cuniculus ENSOCUG00000014842 I 0.425
Sox30 Rattus norvegicus ENSRNOG00000006098 I 0.425
EmuJ_000848600 Echinococcus multilocularis EmuJ_000848600 I 0.425
ENSPANG00000026421 Papio anubis ENSPANG00000026421 I 0.425
SOX30 Pan troglodytes ENSPTRG00000017471 I 0.425
SOX30 Ochotona princeps ENSOPRG00000013760 I 0.425
SOX30 Otolemur garnettii ENSOGAG00000009055 I 0.425
SOX30 Tupaia belangeri ENSTBEG00000009070 I 0.425
ENSNLEG00000004158 Nomascus leucogenys ENSNLEG00000004158 I 0.425
SOX30 Vicugna pacos ENSVPAG00000007838 I 0.425
SOX30 Microcebus murinus ENSMICG00000001020 I 0.425
ENSMEUG00000014457 Macropus eugenii ENSMEUG00000014457 I 0.425
SOX30 Loxodonta africana ENSLAFG00000004922 I 0.425
SOX30 Myotis lucifugus ENSMLUG00000015904 I 0.425
ENSTTRG00000012986 Tursiops truncatus ENSTTRG00000012986 I 0.425
Sox30 Mus musculus ENSMUSG00000040489 D 0.425
ENSMPUG00000013465 Mustela putorius furo ENSMPUG00000013465 I 0.425
SOX30 Monodelphis domestica ENSMODG00000008341 I 0.425
ENSMMUG00000021550 Macaca mulatta ENSMMUG00000021550 I 0.425
ACYPI008614 Acyrthosiphon pisum ACYPI008614 I 0.423
SPER_0002170401 Spirometra erinaceieuropaei SPER_0002170401 I 0.423
PHUM136210 Pediculus humanus PHUM136210 I 0.423
HHAL004464-PA Halyomorpha halys HHAL004464-PA I 0.423
LDEC019308 Leptinotarsa decemlineata LDEC019308 I 0.423
SMU15036985 Schmidtea mediterranea SMU15036985 I 0.423
sox15.L Xenopus laevis XB-GENE-6252630 I 0.423
L798_12048 Zootermopsis nevadensis L798_12048 I 0.423
CLEC006963 Cimex lectularius CLEC006963 I 0.423
ENSAPLG00000013850 Anas platyrhynchos ENSAPLG00000013850 I 0.422
tetur03g05800 Tetranychus urticae tetur03g05800 I 0.422
SOX8 Gasterosteus aculeatus ENSGACG00000005620 I 0.421
Afo_R002185 Aptenodytes forsteri Afo_R002185 I 0.421
sox3.S Xenopus laevis XB-GENE-484819 I 0.421
sox3 Xenopus tropicalis XB-GENE-484815 I 0.421
Aan_R015288 Calypte anna Aan_R015288 I 0.421
ENSFALG00000011093 Ficedula albicollis ENSFALG00000011093 I 0.421
Gfo_R003513 Geospiza fortis Gfo_R003513 I 0.421
PXEA_0000285101 Protopolystoma xenopodis PXEA_0000285101 I 0.421
ENSLACG00000004841 Latimeria chalumnae ENSLACG00000004841 I 0.421
ENSPSIG00000000846 Pelodiscus sinensis ENSPSIG00000000846 I 0.421
sox8a Danio rerio ENSDARG00000105301 I 0.421
SOX8 Procavia capensis ENSPCAG00000012287 I 0.421
ENSAPLG00000010582 Anas platyrhynchos ENSAPLG00000010582 I 0.421
SOX3 Taeniopygia guttata ENSTGUG00000006268 I 0.421
AAH89283 Xenopus laevis AAH89283 I 0.421
PXEA_0002181501 Protopolystoma xenopodis PXEA_0002181501 I 0.421
ENSONIG00000019632 Oreochromis niloticus ENSONIG00000019632 I 0.421
SOX8 Takifugu rubripes ENSTRUG00000017165 I 0.420
HelroG74924 Helobdella robusta HelroG74924 I 0.420
SOX8 Tetraodon nigroviridis ENSTNIG00000007408 I 0.420
SOX15 Bos taurus ENSBTAG00000005461 I 0.419
ENSCSAG00000011393 Chlorocebus sabaeus ENSCSAG00000011393 I 0.419
SOX15 Sorex araneus ENSSARG00000006102 I 0.419
SOX15 Pteropus vampyrus ENSPVAG00000016305 I 0.419
SOX15 Pan troglodytes ENSPTRG00000008697 I 0.419
ENSPPYG00000007929 Pongo abelii ENSPPYG00000007929 I 0.419
SOX15 Sus scrofa ENSSSCG00000017954 I 0.419
ENSSTOG00000005654 Ictidomys tridecemlineatus ENSSTOG00000005654 I 0.419
Myotis_brandtii_SOX15_10021054 Myotis brandtii Myotis_brandtii_SOX15_10021054 I 0.419
SOX15 Tursiops truncatus ENSTTRG00000010225 I 0.419
SOX15 Tupaia belangeri ENSTBEG00000009566 I 0.419
SOX15 Procavia capensis ENSPCAG00000013154 I 0.419
ENSPANG00000024056 Papio anubis ENSPANG00000024056 I 0.419
Sox15 Mus musculus ENSMUSG00000041287 D 0.419
ENSMPUG00000009383 Mustela putorius furo ENSMPUG00000009383 I 0.419
SOX15 Myotis lucifugus ENSMLUG00000003435 I 0.419
ENSMICG00000014795 Microcebus murinus ENSMICG00000014795 I 0.419
ENSNLEG00000009660 Nomascus leucogenys ENSNLEG00000009660 I 0.419
ENSOARG00000014928 Ovis aries ENSOARG00000014928 I 0.419
SOX15 Ochotona princeps ENSOPRG00000017106 I 0.419
SOX15 Otolemur garnettii ENSOGAG00000008145 I 0.419
SOX15 Oryctolagus cuniculus ENSOCUG00000001100 I 0.419
SOX15 Gorilla gorilla ENSGGOG00000027463 I 0.419
SOX15 Vicugna pacos ENSVPAG00000000146 I 0.419
ENSBTAP00000007184-D1 Bos grunniens ENSBTAP00000007184-D1 I 0.419
ENSP00000355354 Macaca fascicularis ENSP00000355354 I 0.419
SOX15 Cavia porcellus ENSCPOG00000004915 I 0.419
SOX15 Homo sapiens ENSG00000129194 D 0.419
SOX15 Loxodonta africana ENSLAFG00000001112 I 0.419
SOX15 Callithrix jacchus ENSCJAG00000015111 I 0.419
SOX15 Canis familiaris ENSCAFG00000016662 I 0.419
ENSDNOG00000004931 Dasypus novemcinctus ENSDNOG00000004931 I 0.419
SOX15 Felis catus ENSFCAG00000009619 I 0.419
SOX15 Erinaceus europaeus ENSEEUG00000013305 I 0.419
SOX15 Equus caballus ENSECAG00000007026 I 0.419
Sox15 Dipodomys ordii ENSDORG00000014230 I 0.419
Alligator_sinensis_CCG000388.1 Alligator sinensis Alligator_sinensis_CCG000388.1 I 0.418
Ogr18933 Ophisaurus gracilis Ogr18933 I 0.418
Pvit_11388 Pogona vitticeps Pvit_11388 I 0.418
Cmyd_10009836 Chelonia mydas Cmyd_10009836 I 0.418
NV11920 Nasonia vitripennis NV11920 I 0.418
SOX30 Anolis carolinensis ENSACAG00000003369 I 0.418
CRE00398 Caenorhabditis remanei CRE00398 I 0.418
ENSPSIG00000004756 Pelodiscus sinensis ENSPSIG00000004756 I 0.418
Sakowv30001414m.g Saccoglossus kowalevskii Sakowv30001414m.g I 0.418
CBN11452 Caenorhabditis brenneri CBN11452 I 0.418
BXY_0079600 Bursaphelenchus xylophilus BXY_0079600 I 0.417
TriadG57974 Trichoplax adhaerens TriadG57974 I 0.417
PHUM470900 Pediculus humanus PHUM470900 I 0.417
sox-2 Caenorhabditis elegans WBGene00004949 I 0.417
sox-4 Caenorhabditis elegans WBGene00015716 I 0.417
SSLN_0000679601 Schistocephalus solidus SSLN_0000679601 I 0.416
SMRZ_0000276401 Schistosoma margrebowiei SMRZ_0000276401 I 0.416
SCUD_0001148901 Schistosoma curassoni SCUD_0001148901 I 0.416
D915_02355 Fasciola hepatica D915_02355 I 0.416
T265_06776 Opisthorchis viverrini T265_06776 I 0.416
TASK_0000888201 Taenia asiatica TASK_0000888201 I 0.416
TTAC_0000216201 Hydatigera taeniaeformis TTAC_0000216201 I 0.416
TsM_000511800 Taenia solium TsM_000511800 I 0.416
TRE_0000754201 Trichobilharzia regenti TRE_0000754201 I 0.416
csin100281 Clonorchis sinensis csin100281 I 0.416
PXEA_0001430601 Protopolystoma xenopodis PXEA_0001430601 I 0.416
MCOS_0000671701 Mesocestoides corti MCOS_0000671701 I 0.416
ECANG7_05621 Echinococcus canadensis ECANG7_05621 I 0.416
DILT_0000550201 Diphyllobothrium latum DILT_0000550201 I 0.416
ENSTGUG00000000620 Taeniopygia guttata ENSTGUG00000000620 I 0.415
EFV58022 Trichinella spiralis EFV58022 I 0.415
ENSMGAG00000004987 Meleagris gallopavo ENSMGAG00000004987 I 0.415
CGI_10022931 Crassostrea gigas CGI_10022931 I 0.415
estExt_fgenesh2_pg.C_1670092 Branchiostoma floridae estExt_fgenesh2_pg.C_1670092 I 0.415
XP_002161378.1 Hydra magnipapillata XP_002161378.1 I 0.415
ENSGALG00000003723 Gallus gallus ENSGALG00000003723 I 0.415
D917_00796 Trichinella nativa D917_00796 I 0.415
Afo_R012027 Aptenodytes forsteri Afo_R012027 I 0.415
Gfo_R013263 Geospiza fortis Gfo_R013263 I 0.415
Tal_R002362 Tyto alba Tal_R002362 I 0.415
ENSFALG00000008470 Ficedula albicollis ENSFALG00000008470 I 0.415
Aqu1.217790 Amphimedon queenslandica Aqu1.217790 I 0.415
Aan_R010657 Calypte anna Aan_R010657 I 0.415