chd3 (Xenopus tropicalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XB-GENE-1008908 T335058_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AAI69169 Sox 192 237
XP_002940874 Sox 207 251

Links

Other Sox family TFs
Other Xenopus tropicalis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP22065 Atta cephalotes ACEP22065 N 0.524
ACRE_034400 Acremonium chrysogenum ACRE_034400 N 0.444
BBA_10208 Beauveria bassiana BBA_10208 N 0.431
BGIBMGA002931 Bombyx mori BGIBMGA002931 N 0.440
BOTBODRAFT_40635 Botryobasidium botryosum BOTBODRAFT_40635 N 0.435
CHD3 Pteropus vampyrus ENSPVAG00000016344 N 0.722
chd3 Oryzias latipes ENSORLG00000007107 N 0.673
CHD4 Echinops telfairi ENSETEG00000005912 N 0.550
CHD4 Microcebus murinus ENSMICG00000006588 N 0.550
CHD4 Ochotona princeps ENSOPRG00000003477 N 0.550
chd4b Danio rerio ENSDARG00000025789 N 0.643
CHD5 Gallus gallus ENSGALG00000000747 N 0.722
CHD5 Sus scrofa ENSSSCG00000003366 N 0.722
CHD5 Macaca mulatta ENSMMUG00000016838 N 0.735
CHD5 Echinops telfairi ENSETEG00000004120 N 0.695
ENSAMEG00000017006 Ailuropoda melanoleuca ENSAMEG00000017006 N 0.640
ENSMEUG00000005852 Macropus eugenii ENSMEUG00000005852 N 0.722
ENSMODG00000024829 Monodelphis domestica ENSMODG00000024829 N 0.550
ENSMPUG00000008872 Mustela putorius furo ENSMPUG00000008872 N 0.695
ENSOCUG00000023865 Oryctolagus cuniculus ENSOCUG00000023865 N 0.735
ENSSHAG00000004107 Sarcophilus harrisii ENSSHAG00000004107 N 0.550
ENSTNIG00000004346 Tetraodon nigroviridis ENSTNIG00000004346 N 0.679
GG13363 Drosophila erecta FBgn0105635 N 0.426
GK17504 Drosophila willistoni FBgn0219503 N 0.434
GSTUM_00007488001 Tuber melanosporum GSTUM_00007488001 N 0.425
KGM_21779 Danaus plexippus KGM_21779 N 0.451
LDEC009474 Leptinotarsa decemlineata LDEC009474 N 0.514
MAPG_04417 Magnaporthe poae MAPG_04417 N 0.454
MCINX004608 Melitaea cinxia MCINX004608 N 0.440
MGG_00866 Magnaporthe oryzae MGG_00866 N 0.432
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.469
SINV11745 Solenopsis invicta SINV11745 N 0.524
XP_002941963 Xenopus tropicalis XP_002941963 N 0.550
YQE_12532 Dendroctonus ponderosae YQE_12532 N 0.498