hbp1 (Xenopus tropicalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XB-GENE-950343 T335117_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN

NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.735 0.971
HBP1
M11299_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.735 0.971
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH81362 Sox 451 518

Links

Other Sox family TFs
Other Xenopus tropicalis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pvit_03004 Pogona vitticeps Pvit_03004 I 0.741
HBP1 Anolis carolinensis ENSACAG00000015023 I 0.741
hbp1.S Xenopus laevis XB-GENE-17342930 I 0.741
hbp1.L Xenopus laevis XB-GENE-950348 I 0.741
HBP1 Pan troglodytes ENSPTRG00000019575 I 0.735
ENSPFOG00000003951 Poecilia formosa ENSPFOG00000003951 I 0.735
ENSPSIG00000012478 Pelodiscus sinensis ENSPSIG00000012478 I 0.735
ENSSHAG00000010948 Sarcophilus harrisii ENSSHAG00000010948 I 0.735
ENSSTOG00000013846 Ictidomys tridecemlineatus ENSSTOG00000013846 I 0.735
HBP1 Procavia capensis ENSPCAG00000014060 I 0.735
Hbp1 Rattus norvegicus ENSRNOG00000008927 I 0.735
HBP1 Pteropus vampyrus ENSPVAG00000014543 I 0.735
HBP1 Otolemur garnettii ENSOGAG00000013102 I 0.735
HBP1 Ornithorhynchus anatinus ENSOANG00000003174 I 0.735
ENSNLEG00000008761 Nomascus leucogenys ENSNLEG00000008761 I 0.735
Hbp1 Mus musculus ENSMUSG00000002996 D 0.735
ENSOARG00000005055 Ovis aries ENSOARG00000005055 I 0.735
HBP1 Oryctolagus cuniculus ENSOCUG00000012758 I 0.735
ENSONIG00000008523 Oreochromis niloticus ENSONIG00000008523 I 0.735
HBP1 Tupaia belangeri ENSTBEG00000007793 I 0.735
ENSPANG00000024385 Papio anubis ENSPANG00000024385 I 0.735
hbp1 Takifugu rubripes ENSTRUG00000016990 I 0.735
ENSBTAP00000044156-D1 Bos grunniens ENSBTAP00000044156-D1 I 0.735
Cmyd_10005373 Chelonia mydas Cmyd_10005373 I 0.735
Brh_R002687 Buceros rhinoceros Brh_R002687 I 0.735
ENSP00000420500 Macaca fascicularis ENSP00000420500 I 0.735
Gfo_R011321 Geospiza fortis Gfo_R011321 I 0.735
Tal_R010197 Tyto alba Tal_R010197 I 0.735
Myotis_brandtii_HBP1_10033916 Myotis brandtii Myotis_brandtii_HBP1_10033916 I 0.735
Alligator_sinensis_CCG000124.1 Alligator sinensis Alligator_sinensis_CCG000124.1 I 0.735
Afo_R001715 Aptenodytes forsteri Afo_R001715 I 0.735
ENSMPUG00000018249 Mustela putorius furo ENSMPUG00000018249 I 0.735
hbp1 Tetraodon nigroviridis ENSTNIG00000016027 I 0.735
HBP1 Tursiops truncatus ENSTTRG00000006826 I 0.735
HBP1 Vicugna pacos ENSVPAG00000008629 I 0.735
Aan_R000440 Calypte anna Aan_R000440 I 0.735
ENSXMAG00000016455 Xiphophorus maculatus ENSXMAG00000016455 I 0.735
HBP1 Taeniopygia guttata ENSTGUG00000003100 I 0.735
ENSPPYG00000017898 Pongo abelii ENSPPYG00000017898 I 0.735
hbp1 Danio rerio ENSDARG00000028517 I 0.735
ENSCSAG00000011395 Chlorocebus sabaeus ENSCSAG00000011395 I 0.735
HBP1 Equus caballus ENSECAG00000020969 I 0.735
ENSFALG00000010259 Ficedula albicollis ENSFALG00000010259 I 0.735
HBP1 Homo sapiens ENSG00000105856 D 0.735
HBP1 Felis catus ENSFCAG00000005858 I 0.735
HBP1 Cavia porcellus ENSCPOG00000002375 I 0.735
HBP1 Monodelphis domestica ENSMODG00000016376 I 0.735
ENSAMXG00000017678 Astyanax mexicanus ENSAMXG00000017678 I 0.735
ENSAMEG00000013492 Ailuropoda melanoleuca ENSAMEG00000013492 I 0.735
ENSAPLG00000007110 Anas platyrhynchos ENSAPLG00000007110 I 0.735
HBP1 Bos taurus ENSBTAG00000005524 I 0.735
HBP1 Callithrix jacchus ENSCJAG00000016260 I 0.735
HBP1 Canis familiaris ENSCAFG00000003939 I 0.735
HBP1 Gallus gallus ENSGALG00000008050 I 0.735
HBP1 Dasypus novemcinctus ENSDNOG00000004405 I 0.735
ENSLACG00000009119 Latimeria chalumnae ENSLACG00000009119 I 0.735
ENSGMOG00000013782 Gadus morhua ENSGMOG00000013782 I 0.735
HBP1 Loxodonta africana ENSLAFG00000005317 I 0.735
HBP1 Myotis lucifugus ENSMLUG00000012425 I 0.735
HBP1 Microcebus murinus ENSMICG00000012858 I 0.735
HBP1 Gorilla gorilla ENSGGOG00000007788 I 0.735
HBP1 Macaca mulatta ENSMMUG00000015409 I 0.735
HBP1 Meleagris gallopavo ENSMGAG00000006880 I 0.735
ENSLOCG00000015822 Lepisosteus oculatus ENSLOCG00000015822 I 0.735
hbp1 Oryzias latipes ENSORLG00000004396 I 0.733
ENSPFOG00000012271 Poecilia formosa ENSPFOG00000012271 I 0.716
ENSXMAG00000007586 Xiphophorus maculatus ENSXMAG00000007586 I 0.716
ENSONIG00000011868 Oreochromis niloticus ENSONIG00000011868 I 0.716
SMAR013235 Strigamia maritima SMAR013235 I 0.706
ENSTNIG00000002023 Tetraodon nigroviridis ENSTNIG00000002023 I 0.687
ENSTRUG00000011881 Takifugu rubripes ENSTRUG00000011881 I 0.684
ENSGACG00000019192 Gasterosteus aculeatus ENSGACG00000019192 I 0.665
ENSORLG00000009474 Oryzias latipes ENSORLG00000009474 I 0.655
hbp1 Gasterosteus aculeatus ENSGACG00000010054 I 0.650
e_gw.633.29.1 Branchiostoma floridae e_gw.633.29.1 I 0.639
e_gw.61.169.1 Branchiostoma floridae e_gw.61.169.1 I 0.639
XP_002155149.1 Hydra magnipapillata XP_002155149.1 I 0.611
ENSPMAG00000002631 Petromyzon marinus ENSPMAG00000002631 I 0.610
NEMVEDRAFT_v1g120503 Nematostella vectensis NEMVEDRAFT_v1g120503 I 0.604
TriadG55419 Trichoplax adhaerens TriadG55419 I 0.603
CGI_10003963 Crassostrea gigas CGI_10003963 I 0.566
ISCW021979 Ixodes scapularis ISCW021979 I 0.562
DAPPUDRAFT_313324 Daphnia pulex DAPPUDRAFT_313324 I 0.551
PHUM534240 Pediculus humanus PHUM534240 I 0.549
ML040423a Mnemiopsis leidyi ML040423a I 0.544
L798_09303 Zootermopsis nevadensis L798_09303 I 0.526
SNAPOd2T00000335001 Oikopleura dioica SNAPOd2T00000335001 I 0.457
DICSQDRAFT_40774 Dichomitus squalens DICSQDRAFT_40774 I 0.443
ECPE_0001539401 Echinostoma caproni ECPE_0001539401 I 0.443
GB51010 Apis mellifera GB51010 I 0.438
ZYRO0C16214g Zygosaccharomyces rouxii ZYRO0C16214g I 0.435
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I 0.435
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I 0.435
D915_09544 Fasciola hepatica D915_09544 I 0.434
csin104163 Clonorchis sinensis csin104163 I 0.432
T265_01499 Opisthorchis viverrini T265_01499 I 0.432
GI22721 Drosophila mojavensis FBgn0145448 I 0.432
HelroG148167 Helobdella robusta HelroG148167 I 0.431
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.429
tetur23g00840 Tetranychus urticae tetur23g00840 I 0.428
GL12097 Drosophila persimilis FBgn0149705 I 0.425
GA30228 Drosophila pseudoobscura FBgn0263363 I 0.425
ENSTSYG00000010057 Tarsius syrichta ENSTSYG00000010057 I 0.425
PTSG_01623 Salpingoeca rosetta PTSG_01623 I 0.420
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.420
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.420
Smp_148110 Schistosoma mansoni Smp_148110 I 0.417
CANTEDRAFT_136140 Candida tenuis CANTEDRAFT_136140 I 0.415
ENSMEUG00000011116 Macropus eugenii ENSMEUG00000011116 I 0.368
HBP1 Echinops telfairi ENSETEG00000018542 I 0.368
Hbp1 Dipodomys ordii ENSDORG00000010576 I 0.368
HBP1 Sorex araneus ENSSARG00000007731 I 0.368