XP_002941963 (Xenopus tropicalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XP_002941963 T335128_2.00 Misc (2018-Jan-19)
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002941963 Sox 155 199

Links

Other Sox family TFs
Other Xenopus tropicalis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI001198 Acyrthosiphon pisum ACYPI001198 I 0.000
AAEL003978 Aedes aegypti AAEL003978 I 0.000
AALB005349 Anopheles albimanus AALB005349 I 0.000
AATE004981 Anopheles atroparvus AATE004981 I 0.000
ACOM027947 Anopheles coluzzii ACOM027947 I 0.000
ACUA018690 Anopheles culicifacies ACUA018690 I 0.000
ADAC007927 Anopheles darlingi ADAC007927 I 0.000
AFAF000519 Anopheles farauti AFAF000519 I 0.000
AFUN000435 Anopheles funestus AFUN000435 I 0.000
AGAP005390 Anopheles gambiae AGAP005390 I 0.000
AMAM014424 Anopheles maculatus AMAM014424 I 0.000
AMEC006310 Anopheles melas AMEC006310 I 0.000
AMEM010751 Anopheles merus AMEM010751 I 0.000
AMIN007420 Anopheles minimus AMIN007420 I 0.000
AQUA007695 Anopheles quadriannulatus AQUA007695 I 0.000
GB42492 Apis mellifera GB42492 I 0.000
BGLB003738 Biomphalaria glabrata BGLB003738 I 0.000
e_gw.6.95.1 Branchiostoma floridae e_gw.6.95.1 I 0.000
CapteG19364 Capitella teleta CapteG19364 I 0.000
CGI_10005451 Crassostrea gigas CGI_10005451 I 0.000
CpipJ_CPIJ005455 Culex pipiens CpipJ_CPIJ005455 I 0.000
CPIJ005455 Culex quinquefasciatus CPIJ005455 I 0.000
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I 0.000
YQE_07798 Dendroctonus ponderosae YQE_07798 I 0.000
GF25038 Drosophila ananassae FBgn0102030 I 0.000
GG14656 Drosophila erecta FBgn0106912 I 0.000
GH15211 Drosophila grimshawi FBgn0122686 I 0.000
Kah Drosophila melanogaster FBgn0035144 D 0.000
GI16731 Drosophila mojavensis FBgn0139479 I 0.000
GA14370 Drosophila pseudoobscura FBgn0074398 I 0.000
GM14272 Drosophila sechellia FBgn0169198 I 0.000
GJ12475 Drosophila virilis FBgn0199717 I 0.000
GK17557 Drosophila willistoni FBgn0219556 I 0.000
GE21016 Drosophila yakuba FBgn0238298 I 0.000
LDEC013204 Leptinotarsa decemlineata LDEC013204 I 0.000
LCUP006416 Lucilia cuprina LCUP006416 I 0.000
LLOJ001905 Lutzomyia longipalpis LLOJ001905 I 0.000
MDOA000347 Musca domestica MDOA000347 I 0.000
NV16451 Nasonia vitripennis NV16451 I 0.000
Ocbimv22026834m.g Octopus bimaculoides Ocbimv22026834m.g I 0.000
PHUM530390 Pediculus humanus PHUM530390 I 0.000
SINV14822 Solenopsis invicta SINV14822 I 0.000
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I 0.000
tetur14g01820 Tetranychus urticae tetur14g01820 I 0.000
TC002803 Tribolium castaneum TC002803 I 0.000
L798_08219 Zootermopsis nevadensis L798_08219 I 0.000