13606_Multiple (Saccharomyces paradoxus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 13606_Multiple T335134_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IXR1
M08429_2.00
Saccharomyces cerevisiae
CMCCGCTYCCGGYTT

AARCCGGRAGCGGKG
ChIP-chip
Mathelier et al.(2014)
MA0323.1
0.623 1.000
IXR1
M11345_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$IXR1_01
0.623 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
13606_Multiple Sox 1 57
13606_Multiple Sox 62 128

Links

Other Sox family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action