18434_YMR072W (Saccharomyces bayanus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 18434_YMR072W T335142_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF2
M00069_2.00
Saccharomyces cerevisiae
NNCTCTAGASN

NSTCTAGAGNN
PBM
Badis et al.(2008)
ABF2_2116
0.674 0.800
ABF2
M07497_2.00
Saccharomyces cerevisiae
TCTAGAN

NTCTAGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0266.1
0.674 0.800
ABF2
M08605_2.00
Saccharomyces cerevisiae
TCTAGAN

NTCTAGA
Misc
DeBoer et al.(2011)
YMR072W_541
0.674 0.800
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
18434_YMR072W Sox 43 111
18434_YMR072W Sox 116 181

Links

Other Sox family TFs
Other Saccharomyces bayanus TFs

Invalid Input OrderBy

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action