CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB03388.1
(
Alternaria brassicicola
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AB03388.1
T335158_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB03388.1
Sox
175
250
PKKPLTAAFLYHQHARPIVKADLEAALPPGGQIEKNAVQIEVNKRWNELSEEEKEQWKASYRNSMEEYKTALAAYV
Links
Other
Sox
family TFs
Other
Alternaria brassicicola
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SETTUDRAFT_162014
Setosphaeria turcica
SETTUDRAFT_162014
N
0.724
estExt_fgenesh1_pg.C_280025
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_280025
N
0.691
COCSADRAFT_175386
Bipolaris sorokiniana
COCSADRAFT_175386
N
0.691
COCVIDRAFT_18451
Bipolaris victoriae
COCVIDRAFT_18451
N
0.691
COCMIDRAFT_5045
Bipolaris oryzae
COCMIDRAFT_5045
N
0.691
COCCADRAFT_39005
Bipolaris zeicola
COCCADRAFT_39005
N
0.691
COCC4DRAFT_206881
Bipolaris maydis
COCC4DRAFT_206881
N
0.691
PTT_17830
Pyrenophora teres
PTT_17830
N
0.647
PTRG_04765
Pyrenophora triticirepentis
PTRG_04765
N
0.647
LEMA_P089660.1
Leptosphaeria maculans
LEMA_P089660.1
N
0.546
SNOG_11541
Stagonospora nodorum
SNOG_11541
N
0.454
SNOG_11541
Phaeosphaeria nodorum
SNOG_11541
N
0.435