CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB08896.1
(
Alternaria brassicicola
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AB08896.1
T335165_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB08896.1
Sox
130
198
APRPMNCWIIFRDAMHKQLKAQYPSLTVQEISTRCSEIWHSLAPEGKKPWQAAAQSAKEEHLRQHPDYK
Links
Other
Sox
family TFs
Other
Alternaria brassicicola
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRG_07337
Pyrenophora triticirepentis
PTRG_07337
N
0.702
LEMA_P114390.1
Leptosphaeria maculans
LEMA_P114390.1
I
0.685
PTT_09966
Pyrenophora teres
PTT_09966
N
0.668
COCMIDRAFT_88977
Bipolaris oryzae
COCMIDRAFT_88977
I
0.647
COCC4DRAFT_125132
Bipolaris maydis
COCC4DRAFT_125132
I
0.647
COCSADRAFT_159051
Bipolaris sorokiniana
COCSADRAFT_159051
I
0.647
COCVIDRAFT_33898
Bipolaris victoriae
COCVIDRAFT_33898
N
0.564
GLOINDRAFT_47877
Rhizophagus irregularis
GLOINDRAFT_47877
N
0.482
GLOINDRAFT_29935
Rhizophagus irregularis
GLOINDRAFT_29935
N
0.475
ACRE_020880
Acremonium chrysogenum
ACRE_020880
N
0.475
RHTO_01537
Rhodosporidium toruloides
RHTO_01537
N
0.462
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.460
CC1G_07858
Coprinopsis cinerea
CC1G_07858
N
0.459
S40285_04294
Stachybotrys chlorohalonata
S40285_04294
N
0.451
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.447
GSTUM_00001090001
Tuber melanosporum
GSTUM_00001090001
I
0.447
CC1G_03744
Coprinopsis cinerea
CC1G_03744
I
0.446
CBG12840
Caenorhabditis briggsae
CBG12840
I
0.445
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.441
fgenesh1_pg.C_scaffold_14000043
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_14000043
I
0.439
fgeneshMC_pg.8_#_228
Mucor circinelloides
fgeneshMC_pg.8_#_228
I
0.438
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
0.435
TPHA_0C01510
Tetrapisispora phaffii
TPHA_0C01510
I
0.434
RO3G_03011
Rhizopus oryzae
RO3G_03011
N
0.433
fgeneshMC_pg.2_#_1032
Mucor circinelloides
fgeneshMC_pg.2_#_1032
N
0.433
RO3G_10625
Rhizopus oryzae
RO3G_10625
N
0.433
fgeneshMC_pg.3_#_381
Mucor circinelloides
fgeneshMC_pg.3_#_381
N
0.433
estExt_fgeneshPB_pg.C_100218
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_100218
N
0.433
Moror_1142
Moniliophthora roreri
Moror_1142
N
0.432
gw1.11.239.1
Sporobolomyces roseus
gw1.11.239.1
N
0.432
M422DRAFT_89750
Sphaerobolus stellatus
M422DRAFT_89750
I
0.431
M422DRAFT_121750
Sphaerobolus stellatus
M422DRAFT_121750
N
0.431
M422DRAFT_126587
Sphaerobolus stellatus
M422DRAFT_126587
N
0.431
GLOINDRAFT_46580
Rhizophagus irregularis
GLOINDRAFT_46580
I
0.430
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.430
KAFR_0G02830
Kazachstania africana
KAFR_0G02830
I
0.429
fgeneshPB_pg.1__316
Phycomyces blakesleeanus
fgeneshPB_pg.1__316
N
0.429
BN946_scf184829.g29
Trametes cinnabarina
BN946_scf184829.g29
I
0.427
J056_002766
Wallemia ichthyophaga
J056_002766
N
0.427
DICSQDRAFT_67430
Dichomitus squalens
DICSQDRAFT_67430
I
0.426
AGOS_ADL331C
Ashbya gossypii
AGOS_ADL331C
I
0.425
AACERI_AaceriADL331C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL331C
I
0.425
Ecym_3473
Eremothecium cymbalariae
Ecym_3473
I
0.425
SAKL0B07656g
Lachancea kluyveri
SAKL0B07656g
I
0.424
SCHCODRAFT_111683
Schizophyllum commune
SCHCODRAFT_111683
N
0.423
M422DRAFT_110441
Sphaerobolus stellatus
M422DRAFT_110441
N
0.422
Moror_4096
Moniliophthora roreri
Moror_4096
I
0.422
SBOR_9074
Sclerotinia borealis
SBOR_9074
I
0.421
SS1G_04006
Sclerotinia sclerotiorum
SS1G_04006
I
0.421
Moror_2734
Moniliophthora roreri
Moror_2734
I
0.421
FGRRES_08890
Fusarium graminearum
FGRRES_08890
N
0.420
FPSE_08224
Fusarium pseudograminearum
FPSE_08224
N
0.420
ZYRO0D15312g
Zygosaccharomyces rouxii
ZYRO0D15312g
I
0.420
DACRYDRAFT_34877
Dacryopinax sp
DACRYDRAFT_34877
N
0.419
M407DRAFT_219396
Tulasnella calospora
M407DRAFT_219396
N
0.418
PLEOSDRAFT_1016849
Pleurotus ostreatus
PLEOSDRAFT_1016849
N
0.418
fgeneshPB_pg.4__59
Phycomyces blakesleeanus
fgeneshPB_pg.4__59
I
0.417
PAXRUDRAFT_47613
Paxillus rubicundulus
PAXRUDRAFT_47613
I
0.416
PAXINDRAFT_17515
Paxillus involutus
PAXINDRAFT_17515
I
0.416
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.415