CBU86735.1 (Babesia bovis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 CBU86735.1 T335172_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN

NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.481 0.522
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN

NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.481 0.522
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN

NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.475 0.478
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN

NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.475 0.478
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBU86735.1 Sox 23 93

Links

Other Sox family TFs
Other Babesia bovis TFs

358 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F443_18315 Phytophthora parasitica F443_18315 N 0.000
PITG_18417 Phytophthora infestans PITG_18417 N 0.000
Physo158880 Phytophthora sojae Physo158880 N 0.000
Phyra81124 Phytophthora ramorum Phyra81124 N 0.000
maker-pve_contig_37-snap-gene-0.50 Pythium vexans maker-pve_contig_37-snap-gene-0.50 N 0.000
maker-pir_contig_292-snap-gene-0.21 Pythium irregulare maker-pir_contig_292-snap-gene-0.21 N 0.000
maker-pag1_scaffold_194-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_194-fgenesh-gene-0.7 N 0.000
HpaG807078 Hyaloperonospora arabidopsidis HpaG807078 N 0.000
HpaG807077 Hyaloperonospora arabidopsidis HpaG807077 N 0.000
fgenesh_scip_prom.46568.8375 Phytophthora kernoviae fgenesh_scip_prom.46568.8375 N 0.000
fgenesh_scip_prom.28083.276 Phytophthora lateralis fgenesh_scip_prom.28083.276 N 0.000
fgenesh_masked-par_contig_1065-abinit-gene-0.12 Pythium arrhenomanes fgenesh_masked-par_contig_1065-abinit-gene-0.12 N 0.000
PYU1_G001764 Pythium ultimum PYU1_G001764 N 0.000