CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EDP42964.1
(
Malassezia globosa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
EDP42964.1
T335183_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDP42964.1
Sox
182
252
PKQPLTAWQLYFTDELRKLKAASPNERLNVAQLAKDAGQRYASLPDDKRQQYFVRGQEARGQYEAALATWR
EDP42964.1
Sox
287
359
PKKPLSAYFLYLRSIRADPEQREDVLRGEHDTTKQSVLAAAKWRSLNADEKRPFVEQAECDKRAYEQRRQAYE
Links
Other
Sox
family TFs
Other
Malassezia globosa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
sr12460
Sporisorium reilianum
sr12460
N
0.447
PAN0_007d3117
Pseudozyma antarctica
PAN0_007d3117
N
0.447
UHOR_02084
Ustilago hordei
UHOR_02084
N
0.447
L804_02037
Cryptococcus gattii
L804_02037
N
0.447
CNA04270
Cryptococcus neoformans
CNA04270
N
0.447
UM01390
Ustilago maydis
UM01390
N
0.447
PSEUBRA_SCAF3g03552
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03552
N
0.447
PaG_03069
Pseudozyma aphidis
PaG_03069
N
0.433
PHSY_004430
Pseudozyma hubeiensis
PHSY_004430
N
0.433
BOTBODRAFT_37556
Botryobasidium botryosum
BOTBODRAFT_37556
N
0.430
M408DRAFT_308571
Serendipita vermifera
M408DRAFT_308571
N
0.425
K437DRAFT_223452
Tilletiaria anomala
K437DRAFT_223452
N
0.418