fgeneshCV_pg.C_scaffold_18000199 (Chlorella vulgaris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgeneshCV_pg.C_scaffold_18000199 T335235_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgeneshCV_pg.C_scaffold_18000199 Sox 619 670

Links

Other Sox family TFs
Other Chlorella vulgaris TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.18_#_36 Coccomyxa subellipsoidea C169 fgenesh1_pg.18_#_36 N 0.741
gw1.30.62.1 Fragilariopsis cylindrus gw1.30.62.1 N 0.463
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.457
EMIHUDRAFT_434306 Emiliania huxleyi EMIHUDRAFT_434306 N 0.450
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.447
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.447
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.447
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.440
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.440
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.440
fgenesh2_pg.scaffold_4000274 Monosiga brevicollis fgenesh2_pg.scaffold_4000274 N 0.438
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.437
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.437
gw1.20.85.1 Ostreococcus RCC809 gw1.20.85.1 N 0.436
SERLA73DRAFT_131740 Serpula lacrymans SERLA73DRAFT_131740 I 0.433
GLOINDRAFT_349538 Rhizophagus irregularis GLOINDRAFT_349538 N 0.431
OFLC_0001223401 Onchocerca flexuosa OFLC_0001223401 N 0.427
GGTG_05735 Gaeumannomyces graminis GGTG_05735 N 0.427
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.423
est_cluster_kg.Chr_07__66__3199198:1 Micromonas sp RCC299 est_cluster_kg.Chr_07__66__3199198:1 N 0.423
mgf001016m Mimulus guttatus mgf001016m I 0.422
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.422
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.422
BGHDH14_bgh06194 Blumeria graminis BGHDH14_bgh06194 I 0.419
AMAG_02504 Allomyces macrogynus AMAG_02504 I 0.418
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.417
TVAG_453060 Trichomonas vaginalis TVAG_453060 N 0.416
ENSMEUG00000004078 Macropus eugenii ENSMEUG00000004078 N 0.416