CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0D06908g
(
Kluyveromyces thermotolerans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
KLTH0D06908g
T335254_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IXR1
M08429_2.00
Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG
ChIP-chip
Mathelier et al.(2014)
MA0323.1
0.614
0.669
IXR1
M11345_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$IXR1_01
0.614
0.669
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0D06908g
Sox
229
297
PKRPSSAYFLFSMAVREDLVREYPDAKVPELSKLASAKWKEMSDEDKKPYHVKFKENWEKYRIARKEYE
KLTH0D06908g
Sox
302
368
PKRPSGPFIQFTQEVRPQIIRENPQKDLIEITKLIGEKWRSLSPVDKRTYTDTYKRKLKEWEEQYPE
Links
Other
Sox
family TFs
Other
Kluyveromyces thermotolerans
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy