Pc22g05580 (Penicillium chrysogenum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pc22g05580 T335296_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY

RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.604 0.449
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW

WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.507 0.420
ste11
M11343_2.00
Schizosaccharomyces pombe Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.507 0.420
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW

AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.484 0.319
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD

HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.484 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pc22g05580.t1 Sox 180 248

Links

Other Sox family TFs
Other Penicillium chrysogenum TFs

Invalid Input OrderBy

348 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action