CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_044390
(
Penicillium marneffei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PMAA_044390
T335315_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_044390.t1
Sox
260
326
VKRPVSAFLWFFKERVATGEYRGLPVTEISERVKAEWVNTSDSEKQLYLTKAEEDRQRYITEYRDTY
Links
Other
Sox
family TFs
Other
Penicillium marneffei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PMAA_044390
Talaromyces marneffei
PMAA_044390
N
0.741
TSTA_074230
Talaromyces stipitatus
TSTA_074230
N
0.640
TRIUR3_34670
Triticum urartu
TRIUR3_34670
I
0.420
Traes_6DL_E5B5F44FC
Triticum aestivum
Traes_6DL_E5B5F44FC
I
0.420
Traes_6AL_9EC9874F1
Triticum aestivum
Traes_6AL_9EC9874F1
I
0.420
Traes_6BL_017F7FCF8
Triticum aestivum
Traes_6BL_017F7FCF8
I
0.420
F775_30706
Aegilops tauschii
F775_30706
I
0.420
PDE_07097
Penicillium oxalicum
PDE_07097
N
0.418