CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
XP_002156373.1
(
Hydra magnipapillata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
XP_002156373.1
T335337_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002156373.1
Sox
26
95
IKKPTSAYIYFVSDYRLVLKKKGKATNKVNEVAKMCGTAWNAMKENEKAPYYEKYNIDKARYLKEKEALD
XP_002156373.1
Sox
105
172
PKRCQTAYFFFLHDFREQMKGKALLEGEKIPALAGEKWRSMTDDEKKVYNDMVQKDKQRYEKAMEEWK
Links
Other
Sox
family TFs
Other
Hydra magnipapillata
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEMVEDRAFT_v1g185184
Nematostella vectensis
NEMVEDRAFT_v1g185184
N
0.472