CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002159252.1
(
Hydra magnipapillata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
XP_002159252.1
T335341_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.484
0.418
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002159252.1
Sox
548
614
PKRPMSAFMLYMNEVREKIKADNPGIAFTDIAKKGGEQWKTLTDKTKWENMAKEAKNKYTIDFAAYS
Links
Other
Sox
family TFs
Other
Hydra magnipapillata
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.486
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.484
NCU02819
Neurospora crassa
NCU02819
D
0.484
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.484
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.484
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.480
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.480
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.480
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.480
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.480
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.480
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.480
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.480
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.480
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.480
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.476
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.476
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.472
ENSCJAG00000031139
Callithrix jacchus
ENSCJAG00000031139
I
0.472
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.470
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.465
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.459
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.459
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.456
X797_001988
Metarhizium robertsii
X797_001988
I
0.456
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.456
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.456
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.456
ENSCAFG00000016282
Canis familiaris
ENSCAFG00000016282
I
0.454
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.452
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.452
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.451
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
0.448
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.448
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.448
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.448
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.448
CLEC003860
Cimex lectularius
CLEC003860
I
0.447
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.446
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.446
BBA_01214
Beauveria bassiana
BBA_01214
I
0.446
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.446
mgf024995m
Mimulus guttatus
mgf024995m
I
0.445
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.443
GL11071
Drosophila persimilis
FBgn0148681
N
0.443
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
0.442
GI18750
Drosophila mojavensis
FBgn0141489
N
0.442
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.439
ACEP16595
Atta cephalotes
ACEP16595
I
0.439
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.436
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.435
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.435
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.435
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.435
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.435
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.435
PV10_01993
Exophiala mesophila
PV10_01993
I
0.435
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.433
TC012866
Tribolium castaneum
TC012866
N
0.430
M408DRAFT_332518
Serendipita vermifera
M408DRAFT_332518
N
0.429
HmgZ
Drosophila yakuba
FBgn0068145
I
0.429
GK15658
Drosophila willistoni
FBgn0217663
I
0.429
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.429
GD25171
Drosophila simulans
FBgn0196483
I
0.429
M408DRAFT_333748
Serendipita vermifera
M408DRAFT_333748
N
0.429
GF11622
Drosophila ananassae
FBgn0088662
I
0.429
GG20749
Drosophila erecta
FBgn0112936
I
0.429
GM15692
Drosophila sechellia
FBgn0170608
I
0.429
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.428
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.427
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.427
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.427
MBM_02410
Marssonina brunnea
MBM_02410
I
0.427
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.427
CapteG172235
Capitella teleta
CapteG172235
I
0.427
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.426
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.425
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.424
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.424
GI20867
Drosophila mojavensis
FBgn0143601
I
0.424
GJ20604
Drosophila virilis
FBgn0207743
I
0.424
GL17523
Drosophila persimilis
FBgn0155126
I
0.424
GH20784
Drosophila grimshawi
FBgn0128247
I
0.424
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.422
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.422
Thaps36592
Thalassiosira pseudonana
Thaps36592
N
0.420
SMAR015352
Strigamia maritima
SMAR015352
N
0.418
CCM_01555
Cordyceps militaris
CCM_01555
I
0.418
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
0.418
MDOA014797
Musca domestica
MDOA014797
I
0.418
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.417
PDK_20s1437671g003
Phoenix dactylifera
PDK_20s1437671g003
I
0.415