CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB002303
(
Biomphalaria glabrata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BGLB002303
T335811_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB002303-PA
Sox
548
624
PKRPQSAYFIWLNEHREQIKEENPGISITDLSKRAGEMWKEVTDKTVKPEMVFDFQEWDEKAKEAKADYQKAMEEYN
Links
Other
Sox
family TFs
Other
Biomphalaria glabrata
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.586
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.518
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.517
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.511
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.493
ENSCSAVG00000011755
Ciona savignyi
ENSCSAVG00000011755
N
0.454
AFAF013045
Anopheles farauti
AFAF013045
N
0.446
ADIR000496
Anopheles dirus
ADIR000496
N
0.446
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.440
ISCW020032
Ixodes scapularis
ISCW020032
N
0.439
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.433
Aqu1.209664
Amphimedon queenslandica
Aqu1.209664
N
0.422
ASIS014507
Anopheles sinensis
ASIS014507
N
0.416