augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 T336075_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1-mRNA-1 Sox 181 245

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.590
Minc06622 Meloidogyne incognita Minc06622 N 0.590
L889_g13125 Steinernema feltiae L889_g13125 N 0.527
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.527
snap_masked-nMf.1.1.scaf06721-processed-gene-0.5 Meloidogyne floridensis snap_masked-nMf.1.1.scaf06721-processed-gene-0.5 N 0.513
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.510
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.503
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.503
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.503
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.489
YQE_05481 Dendroctonus ponderosae YQE_05481 N 0.487
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.476
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.472
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.472
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.472
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.472
NECAME_01599 Necator americanus NECAME_01599 N 0.472
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.472
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.472
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.472
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.472
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.472
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.472
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.472
CBN07735 Caenorhabditis brenneri CBN07735 N 0.464
CBG11867 Caenorhabditis briggsae CBG11867 N 0.464
CBN31697 Caenorhabditis brenneri CBN31697 N 0.464
CRE14258 Caenorhabditis remanei CRE14258 N 0.464
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.464
L898_g14011 Steinernema monticolum L898_g14011 N 0.461
CJA03316 Caenorhabditis japonica CJA03316 N 0.452
CJA30740 Caenorhabditis japonica CJA30740 N 0.452
D917_05046 Trichinella nativa D917_05046 N 0.451
EFV56090 Trichinella spiralis EFV56090 N 0.451
EFV56095 Trichinella spiralis EFV56095 N 0.451
D917_05048 Trichinella nativa D917_05048 N 0.451
D918_06015 Trichuris suis D918_06015 N 0.451
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.444
MDOA008474 Musca domestica MDOA008474 N 0.428
BGIBMGA010711 Bombyx mori BGIBMGA010711 N 0.426
LCUP007789 Lucilia cuprina LCUP007789 N 0.421
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.420
SMAR009325 Strigamia maritima SMAR009325 N 0.415