CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin107639
(
Clonorchis sinensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
csin107639
T336127_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin107639
Sox
1642
1709
LRKPPSGYVLYAGEVRKRLLQERRDAPFGEISREVGQMWRQMSTAQRDLYERKAKLIKRRMEEEQERA
Links
Other
Sox
family TFs
Other
Clonorchis sinensis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
T265_05798
Opisthorchis viverrini
T265_05798
N
0.741
ECPE_0001508301
Echinostoma caproni
ECPE_0001508301
N
0.682
SCUD_0001647201
Schistosoma curassoni
SCUD_0001647201
N
0.599
SMTD_0001069201
Schistosoma mattheei
SMTD_0001069201
N
0.599
A_04259
Schistosoma haematobium
A_04259
N
0.599
Smp_128120
Schistosoma mansoni
Smp_128120
N
0.599
DILT_0000112601
Diphyllobothrium latum
DILT_0000112601
N
0.590
TRE_0001759501
Trichobilharzia regenti
TRE_0001759501
N
0.586
HNAJ_0000040201
Hymenolepis nana
HNAJ_0000040201
N
0.584
TsM_000416400
Taenia solium
TsM_000416400
N
0.584
EmuJ_000829600
Echinococcus multilocularis
EmuJ_000829600
N
0.584
ECANG7_01394
Echinococcus canadensis
ECANG7_01394
N
0.584
HmN_000514500
Hymenolepis microstoma
HmN_000514500
N
0.584
PXEA_0001273001
Protopolystoma xenopodis
PXEA_0001273001
N
0.545
SMU15005401
Schmidtea mediterranea
SMU15005401
N
0.502
Sjc_0009880
Schistosoma japonicum
Sjc_0009880
N
0.478
PHUM244090
Pediculus humanus
PHUM244090
N
0.432
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.422