D917_05046 (Trichinella nativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 D917_05046 T336168_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
D917_05046 Sox 1208 1273

Links

Other Sox family TFs
Other Trichinella nativa TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.430
L892_g13433 Steinernema scapterisci L892_g13433 I 0.516
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.516
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.437
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.425
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.443
ACEP19638 Atta cephalotes ACEP19638 I 0.432
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.443
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.511
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.468
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.468
ASU_00939 Ascaris suum ASU_00939 N 0.515
L889_g13125 Steinernema feltiae L889_g13125 N 0.533
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.521
L898_g14011 Steinernema monticolum L898_g14011 N 0.466
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.426
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.428
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.443
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 N 0.451
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.448
D917_05048 Trichinella nativa D917_05048 N 0.708
D918_03887 Trichuris suis D918_03887 N 0.429
D918_05288 Trichuris suis D918_05288 N 0.623
D918_06015 Trichuris suis D918_06015 N 0.708
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.468
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.462
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.519
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.433
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.531
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.443
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.422
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.701
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.504
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.521
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.483
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.490
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.456
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.483
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.468
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.506
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.468
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.497
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.483
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.443
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.511
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.511
NECAME_01599 Necator americanus NECAME_01599 N 0.468
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.443
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.511
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.443
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.511
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.468
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.443
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.428
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.623
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.468
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.429
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.429
CRE14258 Caenorhabditis remanei CRE14258 N 0.470
CRE28315 Caenorhabditis remanei CRE28315 N 0.482
EFV52201 Trichinella spiralis EFV52201 N 0.429
EFV56090 Trichinella spiralis EFV56090 N 0.741
EFV56095 Trichinella spiralis EFV56095 N 0.708
ISCW005293 Ixodes scapularis ISCW005293 N 0.515
L798_00437 Zootermopsis nevadensis L798_00437 N 0.429
LOAG_11340 Loa loa LOAG_11340 N 0.443
LOAG_15875 Loa loa LOAG_15875 N 0.511
LotgiG144192 Lottia gigantea LotgiG144192 N 0.426
CJA30740 Caenorhabditis japonica CJA30740 N 0.497
CJA17191 Caenorhabditis japonica CJA17191 N 0.439
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.511
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.443
Bm2393 Brugia malayi Bm2393 N 0.511
Bm7765 Brugia malayi Bm7765 N 0.443
Bm9369 Brugia malayi Bm9369 N 0.443
CBG11867 Caenorhabditis briggsae CBG11867 N 0.497
CBN07735 Caenorhabditis brenneri CBN07735 N 0.470
CBN15844 Caenorhabditis brenneri CBN15844 N 0.478
CBN31697 Caenorhabditis brenneri CBN31697 N 0.470
CGI_10018256 Crassostrea gigas CGI_10018256 N 0.453
CJA03316 Caenorhabditis japonica CJA03316 N 0.497
LotgiG176647 Lottia gigantea LotgiG176647 N 0.429
PHUM393920 Pediculus humanus PHUM393920 N 0.429
SMAR009325 Strigamia maritima SMAR009325 N 0.512
Minc06622 Meloidogyne incognita Minc06622 N 0.531
Minc18174 Meloidogyne incognita Minc18174 N 0.428
AEPI010254 Anopheles epiroticus AEPI010254 N 0.429
AFUN005717 Anopheles funestus AFUN005717 N 0.432
AMAM014030 Anopheles maculatus AMAM014030 N 0.429
AMIN005634 Anopheles minimus AMIN005634 N 0.429
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.535
MDOA008474 Musca domestica MDOA008474 N 0.424
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.468
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.468
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.468
LCUP007789 Lucilia cuprina LCUP007789 N 0.416
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.464
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.471
TCM_014800 Theobroma cacao TCM_014800 N 0.418
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.432
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.450
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.450
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.450
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.470
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.511
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.443
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.463
mgf006762m Mimulus guttatus mgf006762m N 0.418
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.468