D917_05048 (Trichinella nativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 D917_05048 T336169_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
D917_05048 Sox 1194 1260

Links

Other Sox family TFs
Other Trichinella nativa TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.496
ACEP19638 Atta cephalotes ACEP19638 I 0.460
ACUA025632 Anopheles culicifacies ACUA025632 N 0.423
AEPI010254 Anopheles epiroticus AEPI010254 N 0.429
AFUN005717 Anopheles funestus AFUN005717 N 0.432
AMAM014030 Anopheles maculatus AMAM014030 N 0.429
AMIN005634 Anopheles minimus AMIN005634 N 0.429
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.496
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.496
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.496
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.496
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.521
ASU_00939 Ascaris suum ASU_00939 N 0.515
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 N 0.451
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.430
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.563
Bm2393 Brugia malayi Bm2393 N 0.511
Bm7765 Brugia malayi Bm7765 N 0.436
Bm9369 Brugia malayi Bm9369 N 0.436
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.430
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.547
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.436
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.448
CBG11867 Caenorhabditis briggsae CBG11867 N 0.470
CBN07735 Caenorhabditis brenneri CBN07735 N 0.470
CBN15844 Caenorhabditis brenneri CBN15844 N 0.478
CBN31697 Caenorhabditis brenneri CBN31697 N 0.470
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.428
CGI_10018256 Crassostrea gigas CGI_10018256 N 0.419
CJA03316 Caenorhabditis japonica CJA03316 N 0.470
CJA17191 Caenorhabditis japonica CJA17191 N 0.439
CJA30740 Caenorhabditis japonica CJA30740 N 0.470
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.429
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.429
CRE14258 Caenorhabditis remanei CRE14258 N 0.470
CRE28315 Caenorhabditis remanei CRE28315 N 0.482
D917_05046 Trichinella nativa D917_05046 N 0.708
D918_03887 Trichuris suis D918_03887 N 0.429
D918_05288 Trichuris suis D918_05288 N 0.656
D918_06015 Trichuris suis D918_06015 N 0.714
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.430
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.496
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.456
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.454
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.436
EFV52201 Trichinella spiralis EFV52201 N 0.435
EFV56090 Trichinella spiralis EFV56090 N 0.708
EFV56095 Trichinella spiralis EFV56095 N 0.741
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.437
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.430
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.422
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.430
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.430
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.463
GB43084 Apis mellifera GB43084 I 0.422
genemark-nMf.1.1.scaf03789-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf03789-processed-gene-0.2 N 0.455
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.511
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.437
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.496
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.496
HMEL005034 Heliconius melpomene HMEL005034 I 0.430
ISCW005293 Ixodes scapularis ISCW005293 N 0.515
ISCW015985 Ixodes scapularis ISCW015985 N 0.428
KGM_14572 Danaus plexippus KGM_14572 I 0.430
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.543
L798_00437 Zootermopsis nevadensis L798_00437 N 0.429
L889_g13125 Steinernema feltiae L889_g13125 N 0.560
L892_g13433 Steinernema scapterisci L892_g13433 I 0.543
L898_g14011 Steinernema monticolum L898_g14011 N 0.466
LCUP007789 Lucilia cuprina LCUP007789 N 0.416
LOAG_11340 Loa loa LOAG_11340 N 0.436
LOAG_15875 Loa loa LOAG_15875 N 0.511
LotgiG109021 Lottia gigantea LotgiG109021 I 0.428
LotgiG176647 Lottia gigantea LotgiG176647 N 0.451
MCINX005468 Melitaea cinxia MCINX005468 I 0.430
MDOA008474 Musca domestica MDOA008474 N 0.424
mgf006762m Mimulus guttatus mgf006762m N 0.418
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.453
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.531
Minc06622 Meloidogyne incognita Minc06622 N 0.531
Minc18174 Meloidogyne incognita Minc18174 N 0.455
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.436
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.436
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.511
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.511
NECAME_01599 Necator americanus NECAME_01599 N 0.496
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.436
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.511
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.436
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.511
NV10488 Nasonia vitripennis NV10488 I 0.430
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.428
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.496
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.436
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.428
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.425
PHUM393920 Pediculus humanus PHUM393920 N 0.429
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.483
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.524
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.443
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.428
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.464
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.430
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.532
SMAR009325 Strigamia maritima SMAR009325 N 0.512
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.521
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.443
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.483
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.428
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.477
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.490
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.456
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.483
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.496
TC012723 Tribolium castaneum TC012723 I 0.430
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.506
TCM_014800 Theobroma cacao TCM_014800 N 0.418
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.496
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.459
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.478
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.478
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.478
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.629
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.707
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.470
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.511
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.436
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.511
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.436