CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D918_05288
(
Trichuris suis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D918_05288
T336189_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D918_05288
Sox
1054
1121
TARSKSGYILFSAVVRKRIMAENPDCSFGDISKIVGSEWKKLSDEEKKRYEEEAQRIADQRAKADMAA
Links
Other
Sox
family TFs
Other
Trichuris suis
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.714
D917_05048
Trichinella nativa
D917_05048
N
0.656
EFV56095
Trichinella spiralis
EFV56095
N
0.656
D918_06015
Trichuris suis
D918_06015
N
0.629
EFV56090
Trichinella spiralis
EFV56090
N
0.623
D917_05046
Trichinella nativa
D917_05046
N
0.623
TMUE_s0227000300
Trichuris muris
TMUE_s0227000300
N
0.622
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.586
ASU_00939
Ascaris suum
ASU_00939
N
0.579
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.575
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.575
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.575
Bm2393
Brugia malayi
Bm2393
N
0.575
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.575
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.575
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.575
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.571
BGLB013626
Biomphalaria glabrata
BGLB013626
N
0.571
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.530
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.521
LOAG_15875
Loa loa
LOAG_15875
N
0.519
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.519
L596_g21045
Steinernema carpocapsae
L596_g21045
I
0.507
L892_g13433
Steinernema scapterisci
L892_g13433
I
0.507
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.500
CBG11867
Caenorhabditis briggsae
CBG11867
N
0.497
CBN31697
Caenorhabditis brenneri
CBN31697
N
0.497
CJA03316
Caenorhabditis japonica
CJA03316
N
0.497
pbrm-1
Caenorhabditis elegans
WBGene00007042
N
0.497
CJA30740
Caenorhabditis japonica
CJA30740
N
0.497
CBN07735
Caenorhabditis brenneri
CBN07735
N
0.497
CRE14258
Caenorhabditis remanei
CRE14258
N
0.497
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.493
SMAR009325
Strigamia maritima
SMAR009325
N
0.493
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.493
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.493
ISCW005293
Ixodes scapularis
ISCW005293
N
0.488
L889_g13125
Steinernema feltiae
L889_g13125
N
0.487
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.486
CRE28315
Caenorhabditis remanei
CRE28315
N
0.480
L898_g14011
Steinernema monticolum
L898_g14011
N
0.475
BTMF_0001478401
Brugia timori
BTMF_0001478401
N
0.474
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.472
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.472
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.472
CJA17191
Caenorhabditis japonica
CJA17191
N
0.466
fgenesh2_pg.scaffold_1690000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1690000001
N
0.465
Sakowv30031460m.g
Saccoglossus kowalevskii
Sakowv30031460m.g
N
0.461
estExt_fgeneshPB_pg.C_360007
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_360007
I
0.458
Minc06622
Meloidogyne incognita
Minc06622
N
0.456
MhA1_Contig232.frz3.gene23
Meloidogyne hapla
MhA1_Contig232.frz3.gene23
N
0.456
Minc18174
Meloidogyne incognita
Minc18174
N
0.455
genemark-nMf.1.1.scaf03789-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf03789-processed-gene-0.2
N
0.455
LotgiG176647
Lottia gigantea
LotgiG176647
N
0.451
RSKR_0000607700
Rhabditophanes kr3021
RSKR_0000607700
N
0.451
MhA1_Contig1224.frz3.gene1
Meloidogyne hapla
MhA1_Contig1224.frz3.gene1
N
0.451
scaffold517-EXSNAP2012.7
Pristionchus exspectatus
scaffold517-EXSNAP2012.7
N
0.449
SPU_025140
Strongylocentrotus purpuratus
SPU_025140
N
0.449
DICVIV_02621
Dictyocaulus viviparus
DICVIV_02621
N
0.448
ENSCING00000003572
Ciona intestinalis
ENSCING00000003572
N
0.448
BXY_0575000
Bursaphelenchus xylophilus
BXY_0575000
N
0.447
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.446
TCM_014800
Theobroma cacao
TCM_014800
N
0.446
mgf006762m
Mimulus guttatus
mgf006762m
N
0.446
EFV52201
Trichinella spiralis
EFV52201
N
0.444
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.443
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.443
Bm9369
Brugia malayi
Bm9369
N
0.440
nDi.2.2.2.g01867
Dirofilaria immitis
nDi.2.2.2.g01867
N
0.440
Bm7765
Brugia malayi
Bm7765
N
0.440
WUBG_03167
Wuchereria bancrofti
WUBG_03167
N
0.440
EEL_0000724001
Elaeophora elaphi
EEL_0000724001
N
0.440
BTMF_0001523401
Brugia timori
BTMF_0001523401
N
0.440
LOAG_11340
Loa loa
LOAG_11340
N
0.440
WBGene00239172
Onchocerca volvulus
WBGene00239172
N
0.440
nLs.2.1.2.g07200
Litomosoides sigmodontis
nLs.2.1.2.g07200
N
0.440
nOo.2.0.1.g03638
Onchocerca ochengi
nOo.2.0.1.g03638
N
0.440
OFLC_0000194401
Onchocerca flexuosa
OFLC_0000194401
N
0.440
nAv.1.0.1.g05839
Acanthocheilonema viteae
nAv.1.0.1.g05839
N
0.440
Gorai.006G024900
Gossypium raimondii
Gorai.006G024900
I
0.439
RO3G_07751
Rhizopus oryzae
RO3G_07751
I
0.438
ENSAMXG00000016832
Astyanax mexicanus
ENSAMXG00000016832
N
0.437
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.437
AFUN005717
Anopheles funestus
AFUN005717
N
0.432
tetur21g01330
Tetranychus urticae
tetur21g01330
N
0.432
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.430
PHUM393920
Pediculus humanus
PHUM393920
N
0.429
AMIN005634
Anopheles minimus
AMIN005634
N
0.429
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.429
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.429
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.429
AMAM014030
Anopheles maculatus
AMAM014030
N
0.429
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.429
D918_03887
Trichuris suis
D918_03887
N
0.429
PEQ_0000212901
Parascaris equorum
PEQ_0000212901
N
0.428
PAXRUDRAFT_828263
Paxillus rubicundulus
PAXRUDRAFT_828263
I
0.427
CY34DRAFT_810312
Suillus luteus
CY34DRAFT_810312
I
0.427
HETIRDRAFT_440787
Heterobasidion irregulare
HETIRDRAFT_440787
I
0.427
HYDPIDRAFT_138070
Hydnomerulius pinastri
HYDPIDRAFT_138070
I
0.427
SCHCODRAFT_76744
Schizophyllum commune
SCHCODRAFT_76744
I
0.427
estExt_fgenesh3_kg.C_50121
Heterobasidion annosum
estExt_fgenesh3_kg.C_50121
I
0.427
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.425
PGTG_04701
Puccinia graminis
PGTG_04701
I
0.424
ANCDUO_06783
Ancylostoma duodenale
ANCDUO_06783
N
0.423
ANCCEY_15918
Ancylostoma ceylanicum
ANCCEY_15918
N
0.423
HCOI01215700
Haemonchus contortus
HCOI01215700
N
0.423
HCOI00076900
Haemonchus contortus
HCOI00076900
N
0.423
TELCIR_16246
Teladorsagia circumcincta
TELCIR_16246
N
0.423
ANCCEY_15064
Ancylostoma ceylanicum
ANCCEY_15064
N
0.423
SVUK_0000363901
Strongylus vulgaris
SVUK_0000363901
N
0.423
ANCCAN_09463
Ancylostoma caninum
ANCCAN_09463
N
0.423
DICVIV_00270
Dictyocaulus viviparus
DICVIV_00270
N
0.423
NECAME_01599
Necator americanus
NECAME_01599
N
0.423
OESDEN_01314
Oesophagostomum dentatum
OESDEN_01314
N
0.423
ACAC_0000973801
Angiostrongylus cantonensis
ACAC_0000973801
N
0.423
ACEP19638
Atta cephalotes
ACEP19638
I
0.422
BTMF_0001006201
Brugia timori
BTMF_0001006201
I
0.422
ENSCSAVG00000009396
Ciona savignyi
ENSCSAVG00000009396
N
0.421
PICST_23779
Scheffersomyces stipitis
PICST_23779
I
0.419
gww1.1.1.1342.1
Pichia stipitis
gww1.1.1.1342.1
I
0.419
DACRYDRAFT_23197
Dacryopinax sp
DACRYDRAFT_23197
I
0.417
PTTG_09594
Puccinia triticina
PTTG_09594
I
0.417