CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_00270
(
Dictyocaulus viviparus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
DICVIV_00270
T336200_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_00270
Sox
107
175
TAKSKSGYILFSAEIRKRIMHENPDSGFGEVSKIVGIEWKKLSDDQKRQYEVRAEYIASERAKQEAVRA
Links
Other
Sox
family TFs
Other
Dictyocaulus viviparus
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AZF1
Arabidopsis thaliana
AT5G67450
D
0.000
AMTR_s00137p00104280
Amborella trichopoda
AMTR_s00137p00104280
I
0.000
Bra040325
Brassica rapa
Bra040325
I
0.000
GRMZM2G455889
Zea mays
GRMZM2G455889
I
0.000
GSMUA_Achr2G13410_001
Musa acuminata
GSMUA_Achr2G13410_001
I
0.000
Cucsa.352740
Cucumis sativus
Cucsa.352740
I
0.000
evm.TU.supercontig_6.32
Carica papaya
evm.TU.supercontig_6.32
I
0.000
Thhalv10001538m.g
Eutrema salsugineum
Thhalv10001538m.g
I
0.000
Thhalv10010909m.g
Eutrema salsugineum
Thhalv10010909m.g
I
0.000
chr1.CM0050.50.nc
Lotus japonicus
chr1.CM0050.50.nc
I
0.000
Bra037845
Brassica rapa
Bra037845
I
0.000
Bra031834
Brassica rapa
Bra031834
I
0.000
Bo1g081350
Brassica oleracea
Bo1g081350
I
0.000
Bo2g168030
Brassica oleracea
Bo2g168030
I
0.000
Bo3g037560
Brassica oleracea
Bo3g037560
I
0.000
Bo4g195370
Brassica oleracea
Bo4g195370
I
0.000
Bo9g019120
Brassica oleracea
Bo9g019120
I
0.000
Bra000372
Brassica rapa
Bra000372
I
0.000
Bra012914
Brassica rapa
Bra012914
I
0.000
Bra029985
Brassica rapa
Bra029985
I
0.000
chr1.LjT45O14.140.nd
Lotus japonicus
chr1.LjT45O14.140.nd
I
0.000