genemark-nMf.1.1.scaf03789-processed-gene-0.2 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 genemark-nMf.1.1.scaf03789-processed-gene-0.2 T336322_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf03789-processed-gene-0.2-mRNA-1 Sox 89 155

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc18174 Meloidogyne incognita Minc18174 N 0.741
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.617
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.468
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.462
EFV56095 Trichinella spiralis EFV56095 N 0.455
D917_05048 Trichinella nativa D917_05048 N 0.455
D918_05288 Trichuris suis D918_05288 N 0.455
ACEP19638 Atta cephalotes ACEP19638 I 0.441
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.441
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.441
L892_g13433 Steinernema scapterisci L892_g13433 I 0.439
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.438
CRE28315 Caenorhabditis remanei CRE28315 N 0.433
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.428
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.428
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.428
D918_06015 Trichuris suis D918_06015 N 0.428
EFV56090 Trichinella spiralis EFV56090 N 0.428
D917_05046 Trichinella nativa D917_05046 N 0.428
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.427
AFUN005717 Anopheles funestus AFUN005717 N 0.427
NEMVEDRAFT_v1g127783 Nematostella vectensis NEMVEDRAFT_v1g127783 N 0.423
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.421
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.420
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.419
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.417