CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000043200
(
Globodera pallida
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
GPLIN_000043200
T336328_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000043200
Sox
5
49
SGGISEMVKIASTNWKSLDEDEKQNYSERAKKICAELRDNFKKLT
GPLIN_000043200
Sox
86
155
PKHPSRSYILFVKERFEKQTEPFKTRDKVRKFVAETAQQWRQMTDAEKQPYVDQGQCNIAAYNVELAEWK
Links
Other
Sox
family TFs
Other
Globodera pallida
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000620600
Globodera pallida
GPLIN_000620600
N
0.508
GPLIN_000620200
Globodera pallida
GPLIN_000620200
N
0.481
GPLIN_001479500
Globodera pallida
GPLIN_001479500
N
0.470
GPLIN_000008800
Globodera pallida
GPLIN_000008800
N
0.463
GPLIN_000673300
Globodera pallida
GPLIN_000673300
N
0.435