GPLIN_000839700 (Globodera pallida)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPLIN_000839700 T336346_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000839700 Sox 133 198

Links

Other Sox family TFs
Other Globodera pallida TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.464
ASIM_0000224701 Anisakis simplex ASIM_0000224701 N 0.450
EFV52201 Trichinella spiralis EFV52201 N 0.439
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.428
LOAG_15875 Loa loa LOAG_15875 N 0.426
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.426
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.425
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.425
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.424
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.419
PHUM393920 Pediculus humanus PHUM393920 N 0.419
ENSCSAVG00000009396 Ciona savignyi ENSCSAVG00000009396 N 0.419
ENSCING00000003572 Ciona intestinalis ENSCING00000003572 N 0.419
TOX2 Sorex araneus ENSSARG00000001080 N 0.419
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.419
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.419
AMIN005634 Anopheles minimus AMIN005634 N 0.418
L798_00437 Zootermopsis nevadensis L798_00437 N 0.418
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.418
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.415