Hba_16915 (Heterorhabditis bacteriophora)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Hba_16915 T336382_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.429 0.214
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.429 0.214
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.429 0.214
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hba_16915 Sox 55 110

Links

Other Sox family TFs
Other Heterorhabditis bacteriophora TFs

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286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action