CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0000793101
(
Hymenolepis nana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HNAJ_0000793101
T336450_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.431
0.377
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000793101-mRNA-1
Sox
567
636
PPRPSSAYIIWFNENRQRIKESLGSSASITSVAKAAGEKWNNMSSDLKAKYQAQADKQKEKYEEDMKVYK
Links
Other
Sox
family TFs
Other
Hymenolepis nana
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.615
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.551
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.531
PPA02261
Pristionchus pacificus
PPA02261
N
0.530
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.530
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.528
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.506
Minc03634
Meloidogyne incognita
Minc03634
N
0.506
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.506
Minc04648
Meloidogyne incognita
Minc04648
N
0.506
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.501
RSKR_0000269500
Rhabditophanes kr3021
RSKR_0000269500
N
0.499
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.498
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.498
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.498
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.496
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.495
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.495
NECAME_16525
Necator americanus
NECAME_16525
N
0.494
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.494
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.494
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.494
PPA06513
Pristionchus pacificus
PPA06513
N
0.494
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.493
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.493
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.490
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.483
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.480
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.478
PHUM125270
Pediculus humanus
PHUM125270
N
0.477
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.476
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.476
LOAG_08062
Loa loa
LOAG_08062
N
0.476
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.476
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.476
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.476
Bm8632
Brugia malayi
Bm8632
N
0.476
ENSCJAG00000031139
Callithrix jacchus
ENSCJAG00000031139
I
0.475
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.473
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.473
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.471
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.471
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.471
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.471
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.471
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.471
ACEP16595
Atta cephalotes
ACEP16595
I
0.470
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.469
TsM_000111500
Taenia solium
TsM_000111500
N
0.466
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.464
CLEC003860
Cimex lectularius
CLEC003860
I
0.464
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.463
ENSCSAVG00000011755
Ciona savignyi
ENSCSAVG00000011755
N
0.462
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.461
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.460
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.456
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.456
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.456
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.456
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.456
LOAG_04347
Loa loa
LOAG_04347
N
0.456
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.456
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.456
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.456
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.456
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.456
Bm2524
Brugia malayi
Bm2524
N
0.456
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.456
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.454
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.454
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.454
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.453
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.453
MBM_02410
Marssonina brunnea
MBM_02410
I
0.453
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.453
ECPE_0001309901
Echinostoma caproni
ECPE_0001309901
N
0.452
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.451
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.451
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.450
A_01848
Schistosoma haematobium
A_01848
N
0.450
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.449
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.449
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.449
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.449
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.449
GL17523
Drosophila persimilis
FBgn0155126
I
0.449
GI20867
Drosophila mojavensis
FBgn0143601
I
0.449
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.449
GM15692
Drosophila sechellia
FBgn0170608
I
0.449
GD25171
Drosophila simulans
FBgn0196483
I
0.449
GK15658
Drosophila willistoni
FBgn0217663
I
0.449
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.449
GJ20604
Drosophila virilis
FBgn0207743
I
0.449
GG20749
Drosophila erecta
FBgn0112936
I
0.449
GH20784
Drosophila grimshawi
FBgn0128247
I
0.449
GF11622
Drosophila ananassae
FBgn0088662
I
0.449
L893_g23503
Steinernema glaseri
L893_g23503
N
0.449
HmgZ
Drosophila yakuba
FBgn0068145
I
0.449
L898_g7743
Steinernema monticolum
L898_g7743
N
0.449
W97_04202
Coniosporium apollinis
W97_04202
I
0.448
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.448
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.446
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.446
PV09_06887
Verruconis gallopava
PV09_06887
I
0.445
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.444
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.444
MDOA014797
Musca domestica
MDOA014797
I
0.443
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.443
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
0.442
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.442
MPH_08050
Macrophomina phaseolina
MPH_08050
I
0.442
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.441
L889_g16198
Steinernema feltiae
L889_g16198
N
0.441
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.441
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.440
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.440
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.440
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.440
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.440
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.440
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.440
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.440
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.440
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.440
PV10_01993
Exophiala mesophila
PV10_01993
I
0.440
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.437
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
0.436
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.436
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
0.436
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
0.436
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
0.436
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
0.436
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
0.436
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
0.436
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
0.436
PTT_17082
Pyrenophora teres
PTT_17082
I
0.436
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
0.436
AB07914.1
Alternaria brassicicola
AB07914.1
I
0.436
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
0.435
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.435
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.434
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.434
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.434
BGLB002303
Biomphalaria glabrata
BGLB002303
N
0.433
SMU15031660
Schmidtea mediterranea
SMU15031660
N
0.433
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.432
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.431
CapteG172235
Capitella teleta
CapteG172235
I
0.431
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.431
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.431
NCU02819
Neurospora crassa
NCU02819
D
0.431
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.431
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.431
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.430
Minc10016
Meloidogyne incognita
Minc10016
N
0.429
LCUP005047
Lucilia cuprina
LCUP005047
N
0.429
Minc01744
Meloidogyne incognita
Minc01744
N
0.429
ENSMMUG00000002541
Macaca mulatta
ENSMMUG00000002541
I
0.427
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.427
TC012866
Tribolium castaneum
TC012866
N
0.425
Bm6643
Brugia malayi
Bm6643
N
0.424
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.423
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.423
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.423
MhA1_Contig128.frz3.gene5
Meloidogyne hapla
MhA1_Contig128.frz3.gene5
N
0.423
MhA1_Contig2971.frz3.fgene1
Meloidogyne hapla
MhA1_Contig2971.frz3.fgene1
N
0.423
L889_g29516
Steinernema feltiae
L889_g29516
N
0.422
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.421
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.421
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.421
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.421
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.421
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.420
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
0.419
LCUP016801
Lucilia cuprina
LCUP016801
N
0.419
ADAC005115
Anopheles darlingi
ADAC005115
N
0.419
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.419
AALB010796
Anopheles albimanus
AALB010796
N
0.419
CJA04355
Caenorhabditis japonica
CJA04355
N
0.419
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.419
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.418
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.418
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.418
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.418
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.417
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.416
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.416
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.416
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.415
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.415