CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0002008001
(
Haemonchus placei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HPLM_0002008001
T336484_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0002008001-mRNA-1
Sox
10
57
NKLVSAYAMFFKERQTYVKKSFPHATFGDISRIVAAQWDALEKHEKIV
Links
Other
Sox
family TFs
Other
Haemonchus placei
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TELCIR_19210
Teladorsagia circumcincta
TELCIR_19210
N
0.651
TELCIR_25179
Teladorsagia circumcincta
TELCIR_25179
N
0.645
NBR_0000051501
Nippostrongylus brasiliensis
NBR_0000051501
N
0.612
Hsal_06265--XP_624018.2_APIME
Harpegnathos saltator
Hsal_06265--XP_624018.2_APIME
N
0.598
ENSTGUG00000014902
Taeniopygia guttata
ENSTGUG00000014902
N
0.597
TCNE_0000652201
Toxocara canis
TCNE_0000652201
N
0.597
TOX2
Sorex araneus
ENSSARG00000001080
N
0.591
ASU_00726
Ascaris suum
ASU_00726
N
0.591
ALUE_0000699101
Ascaris lumbricoides
ALUE_0000699101
N
0.591
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.576
HPBE_0002300401
Heligmosomoides bakeri
HPBE_0002300401
N
0.573
ENSMMUP00000034886
Macaca fascicularis
ENSMMUP00000034886
N
0.571
AMIN005634
Anopheles minimus
AMIN005634
N
0.563
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.563
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.561
SVUK_0000686401
Strongylus vulgaris
SVUK_0000686401
N
0.559
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.557
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.557
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.557
AMAM014030
Anopheles maculatus
AMAM014030
N
0.557
D918_03887
Trichuris suis
D918_03887
N
0.544
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.536
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.531
NECAME_06830
Necator americanus
NECAME_06830
N
0.529
PNEG_03347
Pneumocystis murina
PNEG_03347
I
0.509
PHUM393920
Pediculus humanus
PHUM393920
N
0.501
pbrm1l
Tetraodon nigroviridis
ENSTNIG00000014731
N
0.495
pbrm1l
Takifugu rubripes
ENSTRUG00000005335
N
0.495
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.495
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.487
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.482
CJA17191
Caenorhabditis japonica
CJA17191
N
0.482
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.482
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.482
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.482
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.470
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.470
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.470
BGLB013489
Biomphalaria glabrata
BGLB013489
N
0.463
EFV52201
Trichinella spiralis
EFV52201
N
0.462
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.461
gw1.20.85.1
Ostreococcus RCC809
gw1.20.85.1
N
0.455
CGOC_0001370301
Cylicostephanus goldi
CGOC_0001370301
N
0.452
pbrm-1
Caenorhabditis elegans
WBGene00007042
N
0.450
AFUN005717
Anopheles funestus
AFUN005717
N
0.450
EMIHUDRAFT_208774
Emiliania huxleyi
EMIHUDRAFT_208774
N
0.446
GUITHDRAFT_163519
Guillardia theta
GUITHDRAFT_163519
I
0.443
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.443
RSKR_0000607700
Rhabditophanes kr3021
RSKR_0000607700
N
0.443
CBN07735
Caenorhabditis brenneri
CBN07735
N
0.441
CBN31697
Caenorhabditis brenneri
CBN31697
N
0.441
66829
Aureococcus anophagefferens
66829
N
0.440
67048
Aureococcus anophagefferens
67048
N
0.440
CRE14258
Caenorhabditis remanei
CRE14258
N
0.440
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.435
NCU06874
Neurospora crassa
NCU06874
N
0.434
Sjc_0009880
Schistosoma japonicum
Sjc_0009880
N
0.433
MYCTH_2308522
Myceliophthora thermophila
MYCTH_2308522
I
0.432
GLOINDRAFT_349538
Rhizophagus irregularis
GLOINDRAFT_349538
N
0.429
AAEL000181
Aedes aegypti
AAEL000181
N
0.425
MhA1_Contig232.frz3.gene23
Meloidogyne hapla
MhA1_Contig232.frz3.gene23
N
0.424
Minc06622
Meloidogyne incognita
Minc06622
N
0.424
GLOINDRAFT_337448
Rhizophagus irregularis
GLOINDRAFT_337448
I
0.422
AMAG_00993
Allomyces macrogynus
AMAG_00993
I
0.422
e_gw1.8.519.1
Neurospora discreta
e_gw1.8.519.1
N
0.422
gw1.2.1056.1
Mucor circinelloides
gw1.2.1056.1
N
0.420
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
0.420
BGHDH14_bgh06194
Blumeria graminis
BGHDH14_bgh06194
I
0.420
HMGB1
Ornithorhynchus anatinus
ENSOANG00000011494
N
0.419
ISCW005293
Ixodes scapularis
ISCW005293
N
0.419
M407DRAFT_126438
Tulasnella calospora
M407DRAFT_126438
I
0.418
PDK_20s1781371g001
Phoenix dactylifera
PDK_20s1781371g001
I
0.418
PILCRDRAFT_822980
Piloderma croceum
PILCRDRAFT_822980
I
0.416
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.416