maker-nMf.1.1.scaf02291-snap-gene-0.16 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 maker-nMf.1.1.scaf02291-snap-gene-0.16 T336593_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf02291-snap-gene-0.16-mRNA-1 Sox 22 63

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBN25334 Caenorhabditis brenneri CBN25334 N 0.425
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.426
EMIHUDRAFT_251194 Emiliania huxleyi EMIHUDRAFT_251194 N 0.431
GA28914 Drosophila pseudoobscura FBgn0250273 N 0.419
GLOINDRAFT_98228 Rhizophagus irregularis GLOINDRAFT_98228 N 0.417
L898_g16221 Steinernema monticolum L898_g16221 N 0.447
Minc11458 Meloidogyne incognita Minc11458 N 0.427
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.420
SERLA73DRAFT_158240 Serpula lacrymans SERLA73DRAFT_158240 N 0.425
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.463
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.442