maker-nMf.1.1.scaf05090-augustus-gene-0.8 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 maker-nMf.1.1.scaf05090-augustus-gene-0.8 T336595_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf05090-augustus-gene-0.8-mRNA-1 Sox 52 81
maker-nMf.1.1.scaf05090-augustus-gene-0.8-mRNA-1 Sox 101 131

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L893_g33192 Steinernema glaseri L893_g33192 N 0.473
VDBG_09577 Verticillium albo atrum VDBG_09577 N 0.471
VDBG_09577 Verticillium alfalfae VDBG_09577 N 0.471
GPUH_0001439101 Gongylonema pulchrum GPUH_0001439101 N 0.451
L889_g18776 Steinernema feltiae L889_g18776 N 0.419