nLs.2.1.2.g02941 (Litomosoides sigmodontis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nLs.2.1.2.g02941 T336705_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t02941-RA Sox 174 238

Links

Other Sox family TFs
Other Litomosoides sigmodontis TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.638
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.476
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.428
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.633
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.559
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.564
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.564
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.536
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.474
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.564
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.461
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.633
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.633
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.564
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.423
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.461
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.564
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.521
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.520
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.461
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.638
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.461
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.638
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.505
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.467
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.465
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.546
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.559
ASU_05752 Ascaris suum ASU_05752 N 0.546
ASU_09087 Ascaris suum ASU_09087 N 0.465
ASU_05994 Ascaris suum ASU_05994 N 0.465
ASU_07820 Ascaris suum ASU_07820 N 0.559
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N 0.456
Bm2524 Brugia malayi Bm2524 N 0.422
Bm6643 Brugia malayi Bm6643 N 0.719
Bm8632 Brugia malayi Bm8632 N 0.476
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.625
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.468
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.475
BXY_0308800 Bursaphelenchus xylophilus BXY_0308800 N 0.452
CBN25379 Caenorhabditis brenneri CBN25379 I 0.516
CBG04066 Caenorhabditis briggsae CBG04066 N 0.433
CBG09136 Caenorhabditis briggsae CBG09136 N 0.474
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.480
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.472
CJA19030 Caenorhabditis japonica CJA19030 N 0.420
CJA04355 Caenorhabditis japonica CJA04355 N 0.480
CRE03995 Caenorhabditis remanei CRE03995 N 0.441
CRE11852 Caenorhabditis remanei CRE11852 N 0.474
CGI_10024258 Crassostrea gigas CGI_10024258 N 0.417
ssrp1a Danio rerio ENSDARG00000037397 I 0.456
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.461
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.633
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.722
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.476
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.428
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.488
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.474
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.428
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.625
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.532
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.480
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.428
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.428
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.516
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.516
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.461
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.602
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.461
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.602
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.547
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.595
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.524
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.445
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.419
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.447
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.434
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.428
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.476
LOAG_08062 Loa loa LOAG_08062 N 0.476
LOAG_14354 Loa loa LOAG_14354 N 0.655
LOAG_04347 Loa loa LOAG_04347 N 0.428
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.499
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.499
Minc04648 Meloidogyne incognita Minc04648 N 0.499
Minc03634 Meloidogyne incognita Minc03634 N 0.499
NECAME_16525 Necator americanus NECAME_16525 N 0.521
NECAME_10840 Necator americanus NECAME_10840 N 0.633
NECAME_17555 Necator americanus NECAME_17555 N 0.461
NECAME_17981 Necator americanus NECAME_17981 N 0.461
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.511
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.547
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.602
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.461
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.461
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.625
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.428
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.625
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.428
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.476
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.428
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.625
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.476
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.420
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.461
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.515
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.441
PBANKA_060190 Plasmodium berghei PBANKA_060190 I 0.422
PCHAS_060370 Plasmodium chabaudi PCHAS_060370 I 0.422
PFL0145c Plasmodium falciparum PFL0145c I 0.422
PKH_130170 Plasmodium knowlesi PKH_130170 I 0.422
PVX_084190 Plasmodium vivax PVX_084190 I 0.422
PY05184 Plasmodium yoelii PY05184 I 0.422
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.519
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.467
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.440
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.467
PPA06513 Pristionchus pacificus PPA06513 N 0.519
PPA02261 Pristionchus pacificus PPA02261 N 0.440
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.467
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.426
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.416
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.518
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.491
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.489
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.520
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.474
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.446
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.482
L889_g9094 Steinernema feltiae L889_g9094 N 0.472
L889_g29516 Steinernema feltiae L889_g29516 N 0.471
L889_g16198 Steinernema feltiae L889_g16198 N 0.450
L893_g29974 Steinernema glaseri L893_g29974 N 0.474
L893_g23503 Steinernema glaseri L893_g23503 N 0.448
L898_g7743 Steinernema monticolum L898_g7743 N 0.448
L898_g4830 Steinernema monticolum L898_g4830 N 0.474
L898_g23313 Steinernema monticolum L898_g23313 N 0.434
L892_g19058 Steinernema scapterisci L892_g19058 N 0.467
L892_g23618 Steinernema scapterisci L892_g23618 N 0.441
L892_g2503 Steinernema scapterisci L892_g2503 N 0.482
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.476
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.515
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.476
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.515
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.476
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.515
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.513
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.646
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.456
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.461
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.602
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.602
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.465
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.465
EFV62220 Trichinella spiralis EFV62220 N 0.520
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.625
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.428