nLs.2.1.2.g04689 (Litomosoides sigmodontis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nLs.2.1.2.g04689 T336708_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t04689-RA Sox 101 169

Links

Other Sox family TFs
Other Litomosoides sigmodontis TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.710
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.659
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.458
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.463
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.463
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.463
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.463
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.463
ASIM_0001958001 Anisakis simplex ASIM_0001958001 N 0.531
AALB006415 Anopheles albimanus AALB006415 I 0.648
AARA010616 Anopheles arabiensis AARA010616 I 0.648
AATE016215 Anopheles atroparvus AATE016215 I 0.648
ACUA004409 Anopheles culicifacies ACUA004409 I 0.648
ADAC003252 Anopheles darlingi ADAC003252 I 0.648
AEPI010254 Anopheles epiroticus AEPI010254 N 0.467
AFAF011136 Anopheles farauti AFAF011136 I 0.648
AFUN005717 Anopheles funestus AFUN005717 N 0.466
AGAP000281 Anopheles gambiae AGAP000281 I 0.648
AMAM014030 Anopheles maculatus AMAM014030 N 0.467
AMEC012857 Anopheles melas AMEC012857 I 0.648
AMEM006878 Anopheles merus AMEM006878 I 0.648
AMIN005634 Anopheles minimus AMIN005634 N 0.467
ASIS016667 Anopheles sinensis ASIS016667 I 0.648
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.648
GB43084 Apis mellifera GB43084 I 0.619
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.425
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.439
ASU_00726 Ascaris suum ASU_00726 N 0.439
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.433
ACEP19638 Atta cephalotes ACEP19638 I 0.570
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.419
BGLB012439 Biomphalaria glabrata BGLB012439 N 0.422
BGLB005856 Biomphalaria glabrata BGLB005856 N 0.422
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.627
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.587
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.587
Bm4188 Brugia malayi Bm4188 N 0.708
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.646
CBN31697 Caenorhabditis brenneri CBN31697 N 0.463
CBN07735 Caenorhabditis brenneri CBN07735 N 0.463
CBG11867 Caenorhabditis briggsae CBG11867 N 0.463
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.463
CJA03316 Caenorhabditis japonica CJA03316 N 0.450
CJA30740 Caenorhabditis japonica CJA30740 N 0.450
CRE14258 Caenorhabditis remanei CRE14258 N 0.463
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.625
CLEC001918 Cimex lectularius CLEC001918 I 0.655
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.595
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.595
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.627
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.467
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.467
KGM_14572 Danaus plexippus KGM_14572 I 0.627
tox4b Danio rerio ENSDARG00000100163 I 0.553
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.627
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.463
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.430
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.708
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.472
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.706
EDI_340970 Entamoeba dispar EDI_340970 N 0.454
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.490
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.587
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.599
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.603
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.587
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.621
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.700
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.553
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.463
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.463
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.655
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.432
HMEL005034 Heliconius melpomene HMEL005034 I 0.627
HelroG145107 Helobdella robusta HelroG145107 N 0.593
ISCW018867 Ixodes scapularis ISCW018867 I 0.648
ISCW015985 Ixodes scapularis ISCW015985 N 0.633
LOAG_18151 Loa loa LOAG_18151 N 0.708
LotgiG109021 Lottia gigantea LotgiG109021 I 0.627
LCUP006200 Lucilia cuprina LCUP006200 N 0.523
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.439
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.526
MCINX005468 Melitaea cinxia MCINX005468 I 0.627
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.418
Minc06622 Meloidogyne incognita Minc06622 N 0.418
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.425
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.437
MDOA008605 Musca domestica MDOA008605 N 0.513
Myotis_brandtii_DAP3_10031965 Myotis brandtii Myotis_brandtii_DAP3_10031965 N 0.421
NV10488 Nasonia vitripennis NV10488 I 0.621
NECAME_01599 Necator americanus NECAME_01599 N 0.463
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.594
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.463
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.689
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.689
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.689
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.587
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.614
tox4b Oryzias latipes ENSORLG00000008779 N 0.614
tox2 Oryzias latipes ENSORLG00000004818 N 0.587
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.559
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.587
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.463
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.449
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.427
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.424
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.447
RPRC000650 Rhodnius prolixus RPRC000650 I 0.655
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.438
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.691
nRc.2.0.1.g21669 Romanomermis culicivorax nRc.2.0.1.g21669 N 0.419
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.623
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.581
TOX2 Sorex araneus ENSSARG00000001080 N 0.432
L596_g8243 Steinernema carpocapsae L596_g8243 N 0.420
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.421
L889_g13125 Steinernema feltiae L889_g13125 N 0.456
L893_g19156 Steinernema glaseri L893_g19156 N 0.420
L898_g14011 Steinernema monticolum L898_g14011 N 0.420
L892_g19322 Steinernema scapterisci L892_g19322 N 0.420
L892_g13433 Steinernema scapterisci L892_g13433 I 0.428
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.642
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.463
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.587
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.587
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.432
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.587
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.614
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.463
TTHERM_00216040 Tetrahymena thermophila TTHERM_00216040 N 0.482
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.501
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.474
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.474
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.614
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.587
TCLT_0000844001 Thelazia callipaeda TCLT_0000844001 N 0.593
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.439
TC012723 Tribolium castaneum TC012723 I 0.627
D917_02150 Trichinella nativa D917_02150 N 0.604
EFV61455 Trichinella spiralis EFV61455 N 0.604
EFV52201 Trichinella spiralis EFV52201 N 0.469
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.648
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.658
D918_09264 Trichuris suis D918_09264 N 0.658
D918_03887 Trichuris suis D918_03887 N 0.467
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.658
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.648
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.708
tox4.S Xenopus laevis XB-GENE-993810 I 0.553
XP_002936155 Xenopus tropicalis XP_002936155 N 0.587
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.587
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.581
L798_00437 Zootermopsis nevadensis L798_00437 N 0.473