nRc.2.0.1.g21669 (Romanomermis culicivorax)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nRc.2.0.1.g21669 T336752_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t21669-RA Sox 177 245

Links

Other Sox family TFs
Other Romanomermis culicivorax TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nRc.2.0.1.g36724 Romanomermis culicivorax nRc.2.0.1.g36724 N 0.528
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.479
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.476
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.473
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.473
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.473
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.473
tox2 Oryzias latipes ENSORLG00000004818 N 0.473
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.473
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.473
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.473
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.473
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.473
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.473
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.473
tox4.S Xenopus laevis XB-GENE-993810 I 0.473
HelroG145107 Helobdella robusta HelroG145107 N 0.473
tox4b Danio rerio ENSDARG00000100163 I 0.473
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.473
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.473
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.473
XP_002936155 Xenopus tropicalis XP_002936155 N 0.473
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.446
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.446
tox4b Oryzias latipes ENSORLG00000008779 N 0.446
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.446
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.441
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.441
RO3G_05222 Rhizopus oryzae RO3G_05222 N 0.441
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.440
GB43084 Apis mellifera GB43084 I 0.439
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.439
TC012723 Tribolium castaneum TC012723 I 0.439
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.439
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.439
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.439
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.439
MDOA008605 Musca domestica MDOA008605 N 0.439
NV10488 Nasonia vitripennis NV10488 I 0.439
ISCW015985 Ixodes scapularis ISCW015985 N 0.439
HMEL005034 Heliconius melpomene HMEL005034 I 0.439
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.439
KGM_14572 Danaus plexippus KGM_14572 I 0.439
LotgiG109021 Lottia gigantea LotgiG109021 I 0.439
MCINX005468 Melitaea cinxia MCINX005468 I 0.439
D917_02150 Trichinella nativa D917_02150 N 0.436
EFV61455 Trichinella spiralis EFV61455 N 0.436
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.434
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.429
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.419
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.416
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.416
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.416