CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OESDEN_24828
(
Oesophagostomum dentatum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
OESDEN_24828
T336790_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OESDEN_24828
Sox
14
76
PKRALSAFFFFSQDRRPEVQQMHPEWKVGQVAQELGRMWKNVSMEEKDMYERKALADKERYAE
Links
Other
Sox
family TFs
Other
Oesophagostomum dentatum
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI01912600
Haemonchus contortus
HCOI01912600
I
0.638
HCOI01913300
Haemonchus contortus
HCOI01913300
I
0.638
ACEP16621
Atta cephalotes
ACEP16621
N
0.528
OPUNC08G00150
Oryza punctata
OPUNC08G00150
I
0.520
OBART08G00070
Oryza barthii
OBART08G00070
I
0.520
OGLUM08G00090
Oryza glumaepatula
OGLUM08G00090
I
0.520
ORUFI08G00080
Oryza rufipogon
ORUFI08G00080
I
0.520
ONIVA08G00070
Oryza nivara
ONIVA08G00070
I
0.520
BGIOSGA027814
Oryza indica
BGIOSGA027814
I
0.520
OS08G0101100
Oryza sativa
OS08G0101100
I
0.520
OLONG_014445
Oryza longistaminata
OLONG_014445
I
0.520
BGIOSGA027819
Oryza indica
BGIOSGA027819
I
0.520
BTMF_0001080901
Brugia timori
BTMF_0001080901
N
0.514
nOo.2.0.1.g04208
Onchocerca ochengi
nOo.2.0.1.g04208
N
0.514
WUBG_16399
Wuchereria bancrofti
WUBG_16399
N
0.514
OFLC_0000261801
Onchocerca flexuosa
OFLC_0000261801
N
0.514
Sb07g000230
Sorghum bicolor
Sb07g000230
N
0.513
GRMZM2G125648
Zea mays
GRMZM2G125648
N
0.513
Pavir.J10680
Panicum virgatum
Pavir.J10680
N
0.510
PDK_20s1709771g002
Phoenix dactylifera
PDK_20s1709771g002
N
0.507
LPERR08G00140
Leersia perrieri
LPERR08G00140
N
0.501
OB08G10120
Oryza brachyantha
OB08G10120
N
0.501
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
0.491
Ciclev10016587m.g
Citrus clementina
Ciclev10016587m.g
N
0.483
orange1.1g026850m.g
Citrus sinensis
orange1.1g026850m.g
N
0.483
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
0.481
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
0.481
MDP0000205665
Malus domestica
MDP0000205665
I
0.481
Pm006054
Prunus mume
Pm006054
I
0.481
Si014434m.g
Setaria italica
Si014434m.g
N
0.480
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
0.468
D915_02473
Fasciola hepatica
D915_02473
N
0.454
ENSOGAG00000034481
Otolemur garnettii
ENSOGAG00000034481
N
0.453
BGIOSGA023639
Oryza indica
BGIOSGA023639
I
0.451
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.451
PGSC0003DMG400025304
Solanum tuberosum
PGSC0003DMG400025304
I
0.450
CBG20663
Caenorhabditis briggsae
CBG20663
N
0.448
Bo2g160920
Brassica oleracea
Bo2g160920
I
0.447
Bra029371
Brassica rapa
Bra029371
I
0.447
Thhalv10004817m.g
Eutrema salsugineum
Thhalv10004817m.g
N
0.447
ECPE_0000536801
Echinostoma caproni
ECPE_0000536801
N
0.444
HMGB6
Populus trichocarpa
POPTR_0007s15320
I
0.443
evm.TU.supercontig_247.1
Carica papaya
evm.TU.supercontig_247.1
N
0.441
PK14705.1
Cannabis sativa
PK14705.1
I
0.439
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.439
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.438
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.438
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.438
NECAME_17981
Necator americanus
NECAME_17981
N
0.438
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.438
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.438
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.438
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.438
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.438
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.438
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.438
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.438
NECAME_17555
Necator americanus
NECAME_17555
N
0.438
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.436
Aquca_004_00335
Aquilegia coerulea
Aquca_004_00335
I
0.436
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.436
SINV22588
Solenopsis invicta
SINV22588
N
0.436
GB47837
Apis mellifera
GB47837
N
0.436
PRUPE_ppa011596mg
Prunus persica
PRUPE_ppa011596mg
I
0.436
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.434
fgeneshCV_pg.C_scaffold_4000123
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_4000123
N
0.428
fgenesh1_pg.4_#_114
Coccomyxa subellipsoidea C169
fgenesh1_pg.4_#_114
N
0.428
TCM_007659
Theobroma cacao
TCM_007659
I
0.424
Traes_7AL_959534EDB
Triticum aestivum
Traes_7AL_959534EDB
I
0.424
Traes_7DL_824BFE90C
Triticum aestivum
Traes_7DL_824BFE90C
I
0.424
Traes_7BL_871FCAF2F
Triticum aestivum
Traes_7BL_871FCAF2F
I
0.424
TRIUR3_35367
Triticum urartu
TRIUR3_35367
I
0.424
30131.m007272
Ricinus communis
30131.m007272
I
0.422
MLOC_77667
Hordeum vulgare
MLOC_77667
I
0.422
Thhalv10009970m.g
Eutrema salsugineum
Thhalv10009970m.g
I
0.421
SapurV1A.0016s0600
Salix purpurea
SapurV1A.0016s0600
I
0.421
Eucgr.J02535
Eucalyptus grandis
Eucgr.J02535
I
0.421
PRUPE_ppa012972mg
Prunus persica
PRUPE_ppa012972mg
I
0.421
SapurV1A.0085s0030
Salix purpurea
SapurV1A.0085s0030
I
0.421
Bra025838
Brassica rapa
Bra025838
I
0.421
Bo5g030580
Brassica oleracea
Bo5g030580
I
0.421
HMGB3
Arabidopsis thaliana
AT1G20696
I
0.421
Bo7g061420
Brassica oleracea
Bo7g061420
I
0.421
Bo8g070350
Brassica oleracea
Bo8g070350
I
0.421
Carubv10012681m.g
Capsella rubella
Carubv10012681m.g
I
0.421
HMGB3
Arabidopsis lyrata
fgenesh2_kg.1__2258__AT1G20696.3
I
0.421
MDP0000607529
Malus domestica
MDP0000607529
I
0.421
POPTR_0005s10440
Populus trichocarpa
POPTR_0005s10440
I
0.421
29669.m000844
Ricinus communis
29669.m000844
I
0.421
Aquca_015_00344
Aquilegia coerulea
Aquca_015_00344
I
0.421
Pm026798
Prunus mume
Pm026798
I
0.421
Cagra.6160s0027
Capsella grandiflora
Cagra.6160s0027
I
0.421
Bostr.7128s0662
Boechera stricta
Bostr.7128s0662
I
0.421
mgf014518m
Mimulus guttatus
mgf014518m
I
0.420
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.420
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
0.417
GSMUA_Achr2G11060_001
Musa acuminata
GSMUA_Achr2G11060_001
I
0.417
GSMUA_Achr5G11630_001
Musa acuminata
GSMUA_Achr5G11630_001
I
0.417
ENSMMUP00000037751
Macaca fascicularis
ENSMMUP00000037751
N
0.417
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.417
Cla009222
Citrullus lanatus
Cla009222
I
0.417
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.416
GL11071
Drosophila persimilis
FBgn0148681
N
0.416
Ca_09896
Cicer arietinum
Ca_09896
I
0.415
BGIOSGA008782
Oryza indica
BGIOSGA008782
N
0.415
BGIOSGA016928
Oryza indica
BGIOSGA016928
N
0.415
OS04G0564600
Oryza sativa
OS04G0564600
N
0.415
BRADI3G51140
Brachypodium distachyon
BRADI3G51140
N
0.415
OBART02G27340
Oryza barthii
OBART02G27340
N
0.415
ONIVA02G29880
Oryza nivara
ONIVA02G29880
N
0.415
OMERI04G18350
Oryza meridionalis
OMERI04G18350
N
0.415
ORUFI04G23400
Oryza rufipogon
ORUFI04G23400
N
0.415
ONIVA04G20340
Oryza nivara
ONIVA04G20340
N
0.415
OPUNC02G25020
Oryza punctata
OPUNC02G25020
N
0.415
ORGLA04G0188600
Oryza glaberrima
ORGLA04G0188600
N
0.415
OPUNC04G19550
Oryza punctata
OPUNC04G19550
N
0.415
OMERI02G26620
Oryza meridionalis
OMERI02G26620
N
0.415
OGLUM04G21840
Oryza glumaepatula
OGLUM04G21840
N
0.415
OB04G28810
Oryza brachyantha
OB04G28810
N
0.415
OB02G34710
Oryza brachyantha
OB02G34710
N
0.415
ORUFI02G28820
Oryza rufipogon
ORUFI02G28820
N
0.415
OBART04G21800
Oryza barthii
OBART04G21800
N
0.415
OGLUM02G27900
Oryza glumaepatula
OGLUM02G27900
N
0.415
OS02G0670400
Oryza sativa
OS02G0670400
N
0.415
MTR_8g073345
Medicago truncatula
MTR_8g073345
I
0.415