CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OFLC_0001223401
(
Onchocerca flexuosa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
OFLC_0001223401
T336799_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OFLC_0001223401-mRNA-1
Sox
27
77
PKRPRSAYVHFVNARRKELTDSGKHEALRPRSFLADIGKQWKVLPDDQKKV
Links
Other
Sox
family TFs
Other
Onchocerca flexuosa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g02807
Acanthocheilonema viteae
nAv.1.0.1.g02807
N
0.581
WBGene00246010
Onchocerca volvulus
WBGene00246010
N
0.534
nOo.2.0.1.g04260
Onchocerca ochengi
nOo.2.0.1.g04260
N
0.534
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.491
AMAG_02504
Allomyces macrogynus
AMAG_02504
I
0.465
CMT447C
Cyanidioschyzon merolae
CMT447C
I
0.464
gw1.11.235.1
Sporobolomyces roseus
gw1.11.235.1
N
0.461
TCLT_0000054001
Thelazia callipaeda
TCLT_0000054001
N
0.451
nDi.2.2.2.g08184
Dirofilaria immitis
nDi.2.2.2.g08184
N
0.443
LjSGA_040316.1
Lotus japonicus
LjSGA_040316.1
N
0.433
fgeneshCV_pg.C_scaffold_18000199
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_18000199
N
0.427
fgenesh1_pg.18_#_36
Coccomyxa subellipsoidea C169
fgenesh1_pg.18_#_36
N
0.427
CY34DRAFT_417575
Suillus luteus
CY34DRAFT_417575
I
0.422
TELCIR_11967
Teladorsagia circumcincta
TELCIR_11967
N
0.420
Y73E7A.1
Caenorhabditis elegans
WBGene00022268
N
0.420
HPBE_0001252601
Heligmosomoides bakeri
HPBE_0001252601
N
0.420
HCOI00594600
Haemonchus contortus
HCOI00594600
N
0.420
HPLM_0000348901
Haemonchus placei
HPLM_0000348901
N
0.420