CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000607700
(
Rhabditophanes kr3021
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RSKR_0000607700
T336867_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000607700.1
Sox
1416
1481
AKSKSGYILFSAEIRKRVMADHPDEHFGQISRLVGAEWKTLTDYQKKTYEVRASYIAAERAKQEAD
Links
Other
Sox
family TFs
Other
Rhabditophanes kr3021
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g13125
Steinernema feltiae
L889_g13125
N
0.609
Minc06622
Meloidogyne incognita
Minc06622
N
0.602
MhA1_Contig232.frz3.gene23
Meloidogyne hapla
MhA1_Contig232.frz3.gene23
N
0.602
scaffold517-EXSNAP2012.7
Pristionchus exspectatus
scaffold517-EXSNAP2012.7
N
0.587
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.577
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.577
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.577
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.570
ANCDUO_06783
Ancylostoma duodenale
ANCDUO_06783
N
0.556
HCOI00076900
Haemonchus contortus
HCOI00076900
N
0.556
TELCIR_16246
Teladorsagia circumcincta
TELCIR_16246
N
0.556
ANCCEY_15918
Ancylostoma ceylanicum
ANCCEY_15918
N
0.556
DICVIV_00270
Dictyocaulus viviparus
DICVIV_00270
N
0.556
NECAME_01599
Necator americanus
NECAME_01599
N
0.556
OESDEN_01314
Oesophagostomum dentatum
OESDEN_01314
N
0.556
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.556
HCOI01215700
Haemonchus contortus
HCOI01215700
N
0.556
ANCCAN_09463
Ancylostoma caninum
ANCCAN_09463
N
0.556
ANCCEY_15064
Ancylostoma ceylanicum
ANCCEY_15064
N
0.556
SVUK_0000363901
Strongylus vulgaris
SVUK_0000363901
N
0.556
ACAC_0000973801
Angiostrongylus cantonensis
ACAC_0000973801
N
0.556
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1
N
0.527
D917_05048
Trichinella nativa
D917_05048
N
0.524
EFV56095
Trichinella spiralis
EFV56095
N
0.524
CBN07735
Caenorhabditis brenneri
CBN07735
N
0.517
CBG11867
Caenorhabditis briggsae
CBG11867
N
0.517
CRE14258
Caenorhabditis remanei
CRE14258
N
0.517
CBN31697
Caenorhabditis brenneri
CBN31697
N
0.517
pbrm-1
Caenorhabditis elegans
WBGene00007042
N
0.517
L898_g14011
Steinernema monticolum
L898_g14011
N
0.509
BTMF_0001478401
Brugia timori
BTMF_0001478401
N
0.505
CJA30740
Caenorhabditis japonica
CJA30740
N
0.504
CJA03316
Caenorhabditis japonica
CJA03316
N
0.504
TMUE_s0227000300
Trichuris muris
TMUE_s0227000300
N
0.497
D917_05046
Trichinella nativa
D917_05046
N
0.497
EFV56090
Trichinella spiralis
EFV56090
N
0.497
D918_06015
Trichuris suis
D918_06015
N
0.497
PHUM244090
Pediculus humanus
PHUM244090
N
0.487
tetur31g00660
Tetranychus urticae
tetur31g00660
N
0.480
tetur31g01070
Tetranychus urticae
tetur31g01070
N
0.480
tetur31g00840
Tetranychus urticae
tetur31g00840
N
0.480
snap_masked-nMf.1.1.scaf06721-processed-gene-0.5
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf06721-processed-gene-0.5
N
0.477
BGIBMGA010711
Bombyx mori
BGIBMGA010711
N
0.472
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.471
AAEL000181
Aedes aegypti
AAEL000181
N
0.471
L798_12146
Zootermopsis nevadensis
L798_12146
N
0.470
GPUH_0001659301
Gongylonema pulchrum
GPUH_0001659301
N
0.467
LOAG_15875
Loa loa
LOAG_15875
N
0.467
ENSAMXG00000016832
Astyanax mexicanus
ENSAMXG00000016832
N
0.466
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.462
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.457
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.457
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.457
Bm2393
Brugia malayi
Bm2393
N
0.457
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.457
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.457
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.457
YQE_05481
Dendroctonus ponderosae
YQE_05481
N
0.456
ASU_00939
Ascaris suum
ASU_00939
N
0.453
D918_05288
Trichuris suis
D918_05288
N
0.451
CpipJ_CPIJ007271
Culex pipiens
CpipJ_CPIJ007271
N
0.450
BGLB013626
Biomphalaria glabrata
BGLB013626
N
0.450
CPIJ007271
Culex quinquefasciatus
CPIJ007271
N
0.450
LLOJ004028
Lutzomyia longipalpis
LLOJ004028
N
0.449
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.446
ASIM_0001613301
Anisakis simplex
ASIM_0001613301
N
0.446
Cflo_00230--XP_624018.2_APIME
Camponotus floridanus
Cflo_00230--XP_624018.2_APIME
N
0.445
L893_g19156
Steinernema glaseri
L893_g19156
N
0.444
L892_g19322
Steinernema scapterisci
L892_g19322
N
0.444
L596_g8243
Steinernema carpocapsae
L596_g8243
N
0.444
ADAC005840
Anopheles darlingi
ADAC005840
N
0.443
AEPI009418
Anopheles epiroticus
AEPI009418
N
0.443
HPLM_0002008001
Haemonchus placei
HPLM_0002008001
N
0.443
ACUA025632
Anopheles culicifacies
ACUA025632
N
0.443
AMIN002364
Anopheles minimus
AMIN002364
N
0.443
ASTEI10740
Anopheles stephensi
ASTEI10740
N
0.443
AFAF001135
Anopheles farauti
AFAF001135
N
0.442
LCUP007789
Lucilia cuprina
LCUP007789
N
0.442
MDOA008474
Musca domestica
MDOA008474
N
0.442
TC000618
Tribolium castaneum
TC000618
N
0.441
ENSXMAG00000016160
Xiphophorus maculatus
ENSXMAG00000016160
N
0.438
ENSPFOG00000017300
Poecilia formosa
ENSPFOG00000017300
N
0.438
pbrm1l
Danio rerio
ENSDARG00000077038
N
0.438
GK13168
Drosophila willistoni
FBgn0215177
N
0.436
LDEC007066
Leptinotarsa decemlineata
LDEC007066
N
0.431
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.427
MhA1_Contig1224.frz3.gene1
Meloidogyne hapla
MhA1_Contig1224.frz3.gene1
N
0.427
ENSAMXG00000020941
Astyanax mexicanus
ENSAMXG00000020941
N
0.427
nLs.2.1.2.g04689
Litomosoides sigmodontis
nLs.2.1.2.g04689
N
0.427
SMAR009325
Strigamia maritima
SMAR009325
N
0.427
pbrm1l
Takifugu rubripes
ENSTRUG00000005335
N
0.426
pbrm1l
Tetraodon nigroviridis
ENSTNIG00000014731
N
0.426
SPU_002060
Strongylocentrotus purpuratus
SPU_002060
N
0.425
ISCW015985
Ixodes scapularis
ISCW015985
N
0.425
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.424
AFUN005717
Anopheles funestus
AFUN005717
N
0.423
SMU15005401
Schmidtea mediterranea
SMU15005401
N
0.422
WUBG_03167
Wuchereria bancrofti
WUBG_03167
N
0.421
nOo.2.0.1.g03638
Onchocerca ochengi
nOo.2.0.1.g03638
N
0.421
OFLC_0000194401
Onchocerca flexuosa
OFLC_0000194401
N
0.421
BTMF_0001523401
Brugia timori
BTMF_0001523401
N
0.421
nLs.2.1.2.g07200
Litomosoides sigmodontis
nLs.2.1.2.g07200
N
0.421
EEL_0000724001
Elaeophora elaphi
EEL_0000724001
N
0.421
LOAG_11340
Loa loa
LOAG_11340
N
0.421
Bm7765
Brugia malayi
Bm7765
N
0.421
nAv.1.0.1.g05839
Acanthocheilonema viteae
nAv.1.0.1.g05839
N
0.421
nDi.2.2.2.g01867
Dirofilaria immitis
nDi.2.2.2.g01867
N
0.421
Bm9369
Brugia malayi
Bm9369
N
0.421
WBGene00239172
Onchocerca volvulus
WBGene00239172
N
0.421
PPAI002532
Phlebotomus papatasi
PPAI002532
N
0.421
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.420
DME_0000632401
Dracunculus medinensis
DME_0000632401
N
0.419
CRE28315
Caenorhabditis remanei
CRE28315
N
0.418
CBN15844
Caenorhabditis brenneri
CBN15844
N
0.418
ISCW005293
Ixodes scapularis
ISCW005293
N
0.417
WBGene00236865
Onchocerca volvulus
WBGene00236865
N
0.417
nOo.2.0.1.g12207
Onchocerca ochengi
nOo.2.0.1.g12207
N
0.417
OFLC_0001222801
Onchocerca flexuosa
OFLC_0001222801
N
0.417
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.415
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.415
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.415
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
0.415
CGI_10017717
Crassostrea gigas
CGI_10017717
I
0.415
HelroG145107
Helobdella robusta
HelroG145107
N
0.415
LotgiG109021
Lottia gigantea
LotgiG109021
I
0.415
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.415