RSKR_0000607700 (Rhabditophanes kr3021)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RSKR_0000607700 T336867_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000607700.1 Sox 1416 1481

Links

Other Sox family TFs
Other Rhabditophanes kr3021 TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L889_g13125 Steinernema feltiae L889_g13125 N 0.609
Minc06622 Meloidogyne incognita Minc06622 N 0.602
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.602
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.587
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.577
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.577
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.577
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.570
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.556
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.556
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.556
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.556
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.556
NECAME_01599 Necator americanus NECAME_01599 N 0.556
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.556
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.556
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.556
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.556
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.556
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.556
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.556
augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00485-processed-gene-0.1 N 0.527
D917_05048 Trichinella nativa D917_05048 N 0.524
EFV56095 Trichinella spiralis EFV56095 N 0.524
CBN07735 Caenorhabditis brenneri CBN07735 N 0.517
CBG11867 Caenorhabditis briggsae CBG11867 N 0.517
CRE14258 Caenorhabditis remanei CRE14258 N 0.517
CBN31697 Caenorhabditis brenneri CBN31697 N 0.517
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.517
L898_g14011 Steinernema monticolum L898_g14011 N 0.509
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.505
CJA30740 Caenorhabditis japonica CJA30740 N 0.504
CJA03316 Caenorhabditis japonica CJA03316 N 0.504
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.497
D917_05046 Trichinella nativa D917_05046 N 0.497
EFV56090 Trichinella spiralis EFV56090 N 0.497
D918_06015 Trichuris suis D918_06015 N 0.497
PHUM244090 Pediculus humanus PHUM244090 N 0.487
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.480
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.480
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.480
snap_masked-nMf.1.1.scaf06721-processed-gene-0.5 Meloidogyne floridensis snap_masked-nMf.1.1.scaf06721-processed-gene-0.5 N 0.477
BGIBMGA010711 Bombyx mori BGIBMGA010711 N 0.472
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.471
AAEL000181 Aedes aegypti AAEL000181 N 0.471
L798_12146 Zootermopsis nevadensis L798_12146 N 0.470
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.467
LOAG_15875 Loa loa LOAG_15875 N 0.467
ENSAMXG00000016832 Astyanax mexicanus ENSAMXG00000016832 N 0.466
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.462
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.457
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.457
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.457
Bm2393 Brugia malayi Bm2393 N 0.457
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.457
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.457
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.457
YQE_05481 Dendroctonus ponderosae YQE_05481 N 0.456
ASU_00939 Ascaris suum ASU_00939 N 0.453
D918_05288 Trichuris suis D918_05288 N 0.451
CpipJ_CPIJ007271 Culex pipiens CpipJ_CPIJ007271 N 0.450
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.450
CPIJ007271 Culex quinquefasciatus CPIJ007271 N 0.450
LLOJ004028 Lutzomyia longipalpis LLOJ004028 N 0.449
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.446
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.446
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.445
L893_g19156 Steinernema glaseri L893_g19156 N 0.444
L892_g19322 Steinernema scapterisci L892_g19322 N 0.444
L596_g8243 Steinernema carpocapsae L596_g8243 N 0.444
ADAC005840 Anopheles darlingi ADAC005840 N 0.443
AEPI009418 Anopheles epiroticus AEPI009418 N 0.443
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N 0.443
ACUA025632 Anopheles culicifacies ACUA025632 N 0.443
AMIN002364 Anopheles minimus AMIN002364 N 0.443
ASTEI10740 Anopheles stephensi ASTEI10740 N 0.443
AFAF001135 Anopheles farauti AFAF001135 N 0.442
LCUP007789 Lucilia cuprina LCUP007789 N 0.442
MDOA008474 Musca domestica MDOA008474 N 0.442
TC000618 Tribolium castaneum TC000618 N 0.441
ENSXMAG00000016160 Xiphophorus maculatus ENSXMAG00000016160 N 0.438
ENSPFOG00000017300 Poecilia formosa ENSPFOG00000017300 N 0.438
pbrm1l Danio rerio ENSDARG00000077038 N 0.438
GK13168 Drosophila willistoni FBgn0215177 N 0.436
LDEC007066 Leptinotarsa decemlineata LDEC007066 N 0.431
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.427
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.427
ENSAMXG00000020941 Astyanax mexicanus ENSAMXG00000020941 N 0.427
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N 0.427
SMAR009325 Strigamia maritima SMAR009325 N 0.427
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.426
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.426
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.425
ISCW015985 Ixodes scapularis ISCW015985 N 0.425
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.424
AFUN005717 Anopheles funestus AFUN005717 N 0.423
SMU15005401 Schmidtea mediterranea SMU15005401 N 0.422
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.421
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.421
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.421
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.421
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.421
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.421
LOAG_11340 Loa loa LOAG_11340 N 0.421
Bm7765 Brugia malayi Bm7765 N 0.421
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.421
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.421
Bm9369 Brugia malayi Bm9369 N 0.421
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.421
PPAI002532 Phlebotomus papatasi PPAI002532 N 0.421
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.420
DME_0000632401 Dracunculus medinensis DME_0000632401 N 0.419
CRE28315 Caenorhabditis remanei CRE28315 N 0.418
CBN15844 Caenorhabditis brenneri CBN15844 N 0.418
ISCW005293 Ixodes scapularis ISCW005293 N 0.417
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.417
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.417
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.417
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.415
XP_002936155 Xenopus tropicalis XP_002936155 N 0.415
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.415
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.415
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.415
HelroG145107 Helobdella robusta HelroG145107 N 0.415
LotgiG109021 Lottia gigantea LotgiG109021 I 0.415
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.415