scaffold1445-EXSNAP2012.1 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold1445-EXSNAP2012.1 T336897_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.508 0.609
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1445-EXSNAP2012.1 Sox 135 205

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AFUA_3G15290 Aspergillus fumigatus CADAFUAG00005101 N 0.000
CFIO01_09363 Colletotrichum fioriniae CFIO01_09363 N 0.000
CH063_00153 Colletotrichum higginsianum CH063_00153 N 0.000
MAC_05412 Metarhizium acridum MAC_05412 N 0.000
MAC_05681 Metarhizium acridum MAC_05681 N 0.000
MAJ_06315 Metarhizium majus MAJ_06315 N 0.000
MANI_003941 Metarhizium anisopliae MANI_003941 N 0.000
MBR_05357 Metarhizium brunneum MBR_05357 N 0.000
MGU_05414 Metarhizium guizhouense MGU_05414 N 0.000
PEX1_002100 Penicillium expansum PEX1_002100 N 0.000
PV06_02513 Exophiala oligosperma PV06_02513 N 0.000
PV08_07902 Exophiala spinifera PV08_07902 N 0.000
TRIATDRAFT_54121 Trichoderma atroviride TRIATDRAFT_54121 N 0.000
UCRPA7_8834 Togninia minima UCRPA7_8834 N 0.000