scaffold1445-EXSNAP2012.1 (Pristionchus exspectatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 scaffold1445-EXSNAP2012.1 T336897_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.508 0.609
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold1445-EXSNAP2012.1 Sox 135 205

Links

Other Sox family TFs
Other Pristionchus exspectatus TFs

Invalid Input OrderBy

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action